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Detailed information on CNT0035799


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 6e-24

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0005932 in V. vinifera

CNT0033455 in P. patens

CNT0009867 in S. tuberosum

Most similar lncRNAs:
CNT0005932, E-value = 9e-16 (V. vinifera)
CNT0033455, E-value = 2e-26 (P. patens)
CNT0019050, E-value = 2e-20 (Z. mays)
CNT0028472, E-value = 8e-35 (O. sativa)
CNT0009867, E-value = 1e-21 (S. tuberosum)

Expression of CNT0035799

Peptides detected in this lncRNA

>peptide 1 (101 aa)
DSACCYTACAKRSLQLIAANQNAHSQRPSAALLATAQAQHQVQGRLLLDVVVSQGAAVLQLLAGEDQGRLLLDVVVSQGAAVLQLLAGEDQALLVRGDAC
A*

>peptide 2 (51 aa)
VIAHVVTRRVPSVAFSSSLPTKTPTANVLQPLYWPPRRRSTRCRVDSFWML*

Sequence

>CNT0035799
GTGATAGCGCATGTTGTTACACGGCGTGTGCCAAGCGTAGCCTTCAGCTCATCGCTGCCAACCAAAACGCCCACAGCCAACGTCCTTCAGCCGCTTTACT
GGCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGAT
CAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCT
GTGCGTAGGCGGGGGG