Detailed information on CNT0037550


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0000583, E-value = 2e-07 (G. max)

Expression of CNT0037550

Peptides detected in this lncRNA

>peptide 1 (75 aa)
GGGAGGAAGHGSAARQRRGGHAHQPYRRGHGGHGRAPRGLLGRGGRGRGRRRAAGGGRAAPPAPPAPRRGCGGRG*

>peptide 2 (118 aa)
MWMTTSATWATSRAWPWATPMTTWMRMTTRAMRMRMRMMRTAMRMTTTTTCTAMRRRRARTWTARARAAPPGRSSTRRRTLRVTAVTMRTTPSRTPTAAA
AARPTAGWAAWPPTALTA*

>peptide 3 (126 aa)
RRRGRRRCGPWVGGAAATWWTCSSAVSTRPWRAWARATWAPRTRRTRTRTTTSCWRRAGGAAGATGATPRVRRARMRRTMTSWTLMRWRRTTRMRTRRAR
RARTRMMRARRETWRMRCRCSACRTR*

>peptide 4 (56 aa)
MGTRRRTAGPRTTRRMRRTRATTRVTAPSPTTATRRSTWRAWRRTAPREAARRSCS*

>peptide 5 (362 aa)
EAGPAALRAMGRRRGSDVVDMLISRIDEAMEGMGARHVGSSDEEDEDEDDDELLAEGGRRRRRHRRHAEGAEGEDEEDDDLVDLDEMEEDDEDEDEEGEE
GEDEDDEGEEGDLADEMQMQRLQDEMSEDAEAEEGFDDDEEAHALLHGGDDDDVDDIDVDDDLGDLGDIAGMAMGDPDDDLDEDDDEGDEDEDEDDEDGD
EDDDHHDLHGDEEEEGEDVDGEGEGGAAGEIVDEEEDVEGDGGDDAHDPFADPHGGGGGAANGGLGGLAADGADGMNLLADGDEEADGRAEDDEEDEEDE
GDDEGDGTEPDYGDEEEYLAGMEADGTEGGRAAQLFLNMGAPGDMDDLGLLGGAANGMGGGGR

Sequence

>CNT0037550
CGGAGGCGGGGCCGGCGGCGCTGCGGGCCATGGGTCGGCGGCGCGGCAGCGACGTGGTGGACATGCTCATCAGCCGTATCGACGAGGCCATGGAGGGCAT
GGGCGCGCGCCACGTGGGCTCCTCGGACGAGGAGGACGAGGACGAGGACGACGACGAGCTGCTGGCGGAGGGCGGGCGGCGCCGCCGGCGCCACCGGCGC
CACGCCGAGGGTGCGGAGGGCGAGGATGAGGAGGACGATGACCTCGTGGACCTTGATGAGATGGAGGAGGACGACGAGGATGAGGACGAGGAGGGCGAGG
AGGGCGAGGACGAGGATGATGAGGGCGAGGAGGGAGACCTGGCGGATGAGATGCAGATGCAGCGCCTGCAGGACGAGATGAGTGAGGACGCCGAGGCGGA
GGAGGGCTTTGACGACGACGAGGAGGCGCACGCGCTGCTGCACGGCGGCGACGACGACGACGTCGACGACATCGATGTGGATGACGACCTCGGCGACCTG
GGCGACATCGCGGGCATGGCCATGGGCGACCCCGATGACGACCTGGATGAGGATGACGACGAGGGCGATGAGGATGAGGATGAGGATGATGAGGACGGCG
ATGAGGATGACGACCACCACGACTTGCACGGCGATGAGGAGGAGGAGGGCGAGGACGTGGACGGCGAGGGCGAGGGCGGCGCCGCCGGGGAGATCGTCGA
CGAGGAGGAGGACGTTGAGGGTGACGGCGGTGACGATGCGCACGACCCCTTCGCGGACCCCCACGGCGGCGGCGGCGGCGCGGCCAACGGCGGGCTGGGC
GGCCTGGCCGCCGACGGCGCTGACGGCATGAACCTGCTGGCGGATGGGGACGAGGAGGCGGACGGCCGGGCCGAGGACGACGAGGAGGATGAGGAGGACG
AGGGCGACGACGAGGGTGACGGCACCGAGCCCGACTACGGCGACGAGGAGGAGTACCTGGCGGGCATGGAGGCGGACGGCACCGAGGGAGGCCGCGCGGC
GCAGCTGTTCCTAAACATGGGGGCCCCCGGCGACATGGACGACCTGGGTCTGCTGGGCGGCGCCGCCAACGGCATGGGCGGCGGCGGCCGC