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Detailed information on CNT0040066


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SYA6|RPBAL_ARATH, E-value = 2e-41

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0001739 in G. max

Most similar lncRNAs:
CNT0018457, E-value = 3e-12 (Z. mays)
CNT0001739, E-value = 8e-10 (G. max)

Expression of CNT0040066

ERR364347: 15.518 RPKM

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MIIPVRCFTCGKVIGNKWDTYLDLLQADYPESEALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLERNENNQ*

>peptide 2 (42 aa)
RVEPRTLKPQDDHSSALLHLRQGDRQQMGHLLGSSPGRLPRE*

Sequence

>CNT0040066
AACGAGTCGAGCCAAGAACCCTAAAACCTCAAGATGATCATTCCAGTGCGCTGCTTCACTTGCGGCAAGGTGATCGGCAACAAATGGGACACCTACTTGG
ATCTTCTCCAGGCCGATTACCCAGAGAGTGAAGCGCTCGATGCTTTGGGACTTGTGCGCTACTGCTGCCGGCGAATGCTCATGACTCACGTCGATCTCAT
CGAAAAGCTGCTCAACTACAACACTCTGGAGCGCAACGAAAACAATCAGTGAAGCTTCTGTGAGTCTTGTGACATAGCTAGCCT