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Detailed information on CNT0040820


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana):
NONATHT003045, E-value = 0.0

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005687, E-value = 1e-15 (V. vinifera)
CNT0002709, E-value = 4e-18 (G. max)

Expression of CNT0040820

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MTGALAWQVTKILNKKKKFRVVEGSSHGGFFLPGFSPLACVSCFSLFVHTTFDLDSFT*

Sequence

>CNT0040820
GCCTCACATTAAAAACGCCACTAAACACGTAATCTCTCCAACAATATAAATCTTAGACCGTTGATCTAAACGTTAATCAATTAATCTCGTCCGTCCATTA
CTCCCAACCCTCTATATATAACAACGCGTCGACCTAATTAAGTTCTCATACCCGCTTTATTCATTGATTCATTCAATTTTTGTTCATCGTTTTCTCTAGA
TCTCTCTTCTATATAGTCCTCTCGGAGGTTTTCCGATGAAGATCGTCACTGATCTCCTTCCGATCTACAGATCGGCGTCTTATACGAAGAGATCCAGAGG
CTCCGGTTGATTCCTCGTCAGAAGACGGATCGTCGCGGTTGAGCTCCGAAGATCGGTTGAAGATCTGATCTGATCTTAGATCATGAACCGGCCTCGAGGT
TCGTCAGATCTGCGTTACTGAGCTTTTGATGAGGTGATGAATGATGAATCCGTCAATTCTCTATGGAGCTAGAGAGATGAGAGGGTGAAGAAGAGAGAAG
AAGCTGATATGTGATATTGATGTGAGTTAAGTTGATTGATGGATGTATGAGATGTTTATAGGGACGATATAGTTCTGCGTAAACATCTTTGTCATCCGAC
CTTTGCCATGACAGGTGCGCTTGCATGGCAGGTCACCAAAATCCTTAATAAAAAAAAAAAGTTTCGTGTTGTCGAGGGGAGTTCGCACGGGGGATTTTTT
TTGCCCGGGTTCTCCCCTCTTGCGTGTGTGTCTTGCTTCTCGCTCTTCGTACACACTACCTTTGATCTCGATTCATTCACGTAAATTCTCTCAATACCAC
AGAAATATTCTCGATCCGGATCTTAAGATCAGCGGATCTGGAGACAAGCTGGCCAAATCTTAATCCAACATCCTCCAACCAAGGATGCTTCAAGTGGGGT
GGAATATTGGAGCGACCATATTAGAAATGATTCTCGGTAGCCCATGGAGTTGATCCAAATAGGCAAGGGCAGCCGTAAAAGGGCCTCTGTAAAATTTAGC
ATCTGCCACGGAGGAAGGTGGAATTGATCATTTTTAAAGCAACGGCGTCTAAACATGGACTGACATCCTAAGTCCTAACTAGTTGTGTTATTTGGACTAC
AAGCAATAAGCAAGGAGCATAATTCACTTAACAGTAATAAAAAAACATACTAATGAAAGATGACTGCAAAACTCTGTTAATCATTGTTGGGTTATGATAT
TTATCAAGGCTAACTCATTCACCATCTCTATGTATTCGTCATTTCTTAGTTGATAAAGAATATTTTTATAATATAAAAAAAAAGTTAAGGT