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Detailed information on CNT0041776


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana):
NONATHT001427, E-value = 0.0

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0006512, E-value = 7e-14 (V. vinifera)
CNT0002709, E-value = 4e-18 (G. max)
CNT0014961, E-value = 4e-06 (S. tuberosum)

Expression of CNT0041776

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLIYTQKPIISRVCNQYGAVGDYKSSCPTTSRVKSGTHIHIKSNS*

>peptide 2 (56 aa)
SHHRLHILSRLLLPPSFSPMFSLDLANMATILFFLASNHRRDPPDLQIRSEFSTNL*

>peptide 3 (30 aa)
MEQWAITNLLAQQPRELNQVLISILNRILN*

>peptide 4 (75 aa)
MSGALAWQVKKLILNKKKILWVLERRSHGLLFFPGISSPLCVSSCLCSISLPALSHFISFLNAHIHSKTDHKQSL*

Sequence

>CNT0041776
TATCTCATCACCGCCTCCATATTCTTTCGCGTCTTTTGCTTCCTCCCTCTTTTTCGCCAATGTTTTCTTTAGATCTAGCTAATATGGCGACGATTTTGTT
CTTTCTCGCTTCTAATCACCGTAGAGATCCTCCCGATCTGCAAATCCGATCCGAATTCTCAACGAATTTGTAGATCTGATCTGTGATTCCATCGTTGACG
ACGGATCTTCGCTTACATCGTTTGATCTGTCGCAGATCTGCCGTTTTCTATAGATCTAGATCTGGATCGTCCTTCGCGGCTTCTTCACATGCAAGATTCT
GTGAATTGTTCAAGTTGAGGCATCATTTCTGGATTACTAGGAGACGAATCTGTTGCAGACGGATGTGTGTGTGTTGGATTGAATTGAGATTAGGGTGTAG
AAGATGTTTTGTGGATAGCTAATAGCTTCCTGATTGCATCTCTGTCATCCGACCTTTGCCATGTCAGGTGCGCTTGCATGGCAGGTCAAAAAACTGATCC
TCAATAAAAAAAAGATTTTGTGGGTTTTGGAGAGGAGGTCGCACGGGTTATTATTTTTTCCCGGGATCTCTTCTCCTCTGTGTGTGTCGTCTTGCCTCTG
CTCTATCTCTCTCCCTGCTCTTTCACATTTCATATCTTTCTTAAATGCTCATATACACTCAAAAACCGATCATAAGCAGAGTTTGTAACCAATATGGAGC
AGTGGGCGATTACAAATCTTCTTGCCCAACAACCTCGAGAGTTAAATCAGGTACTCATATCCATATTAAATCGAATTCTTAATTAGCATAATAAGGTAAA
CATAATCTGCAAGAGGAATTCTGGATTTAAATAAACCATAATCCGGTTGCCCTAATTGTTAACTTGTATCAACGCTTATGCGAATCATGAAATTTTAATT
TTATTGGTTTTGTTATTTATCTTATTGATCAATTATTGTTTTACAAGTTGTCATTTAATCTATTGAAAATGATGGTATTAAGAATTGCTGTTAAACAATT
TTGCGGGTTCTTTGTATGTATCATTGGTATTGTTTTATTAGTTCTATCCGTTTAGAAGCTTTTTAGAATATGGTAAAGAACATTTTTATTTGCTCGTAGT
TTGTATATGTCTGTAACCACCAGTTCCTGTAGTAACTATGAAGCTGGTAGACGACGGAATTGAAGCTATGCAAAGCTGACGTTGGTTTTTTCTGAAGTTG
ATTTGTTCTTGAAAGGTATCTTGATCAAAAGATAGTATCTGGTTATGTGCTAAGTCAAAAATTCCTGATATTTATAGTTCATTACATTTTATTTTCTTAG
TTTATTGTGGCCTGTTGTGGAAGAGAACAATCATTATAACATTTTATATAATGAGAAAAGCTTATTGCAATTTTCCTA