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Detailed information on CNT0042030


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0006540, E-value = 2e-09 (V. vinifera)
CNT0034911, E-value = 2e-09 (P. patens)
CNT0018900, E-value = 5e-10 (Z. mays)
CNT0002871, E-value = 2e-09 (G. max)
CNT0021761, E-value = 1e-10 (A. trichopoda)
CNT0031898, E-value = 5e-10 (O. sativa)
CNT0008755, E-value = 8e-09 (S. tuberosum)
CNT0038248, E-value = 8e-09 (S. moellendorffii)

Expression of CNT0042030

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MQRYKLRSFEMASRKIKIKREGNEIHGIDDRFLSLRNSRRSEISRSQTLAGFLLPFFFFFSFFFFLEGALILFYF*

>peptide 2 (66 aa)
TTKLVEEDKKKVEKPYPINPYKRIRTARAPEAKEKTSNSNRERERERERETLSRLKRTHLSISLSS*

>peptide 3 (38 aa)
HNEASRRRQKKSGKTLPNKSLQKNSDSESPRGKGKNLK*

>peptide 4 (32 aa)
MRFTRPPLGFRFYYHKYPSLYKSVAQMTMRHV*

Sequence

>CNT0042030
CACAACGAAGCTAGTAGAAGAAGACAAAAAAAAAGTGGAAAAACCCTACCCAATAAATCCCTACAAAAGAATTCGGACAGCGAGAGCCCCCGAGGCAAAG
GAAAAAACCTCAAATAGCAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACACTGAGTCGGTTGAAGCGCACACACCTTTCTATTTCTCTCTCTTCTT
AGATTTGCATCGAATTTGGGGGAAATCGGAAAACGAAAGTCGCGGGGGATGCAACGGTATAAACTCAGATCCTTTGAGATGGCTTCTCGAAAAATAAAAA
TAAAAAGGGAGGGAAACGAAATCCACGGAATCGATGATCGATTCCTCTCTTTGAGAAATTCACGCAGATCAGAAATTTCTCGCAGTCAAACCCTAGCTGG
CTTCTTACTTCCCTTTTTCTTTTTTTTCTCTTTCTTTTTTTTTTTGGAAGGGGCATTAATTTTATTTTATTTTTGATTGTAGGTCCCACGCCTCGATACA
GTTGGAACACGGAAAATGCGTTTCACGAGGCCACCCCTCGGTTTTCGCTTTTATTACCACAAGTACCCTTCCTTATACAAGTCAGTTGCACAAATGACGA
TGAGACACGTGTGAATTTACCAAACGTTCCTTTTGTTAACCAAATGGAATGACTTTTAATTTTTC