Detailed information on CNT0042901


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8LES0|CSTR5_ARATH, E-value = 2e-12

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0002891, E-value = 1e-06 (G. max)

Expression of CNT0042901

Peptides detected in this lncRNA

>peptide 1 (85 aa)
FSFCFSSLFLSISLKTPATIVIRRSLSFLFFSIVIFISLSLFLVLLHHDIYLSLLPAKSLQHFILRIERVASHNYLFEPLLSSSA*

>peptide 2 (70 aa)
MHLKERLEEEEAVTRTLRAAFDGSIVSLPSLSSLFLPPQFSELFQELAIVEAEILCLDRKIKEQASCVVA*

>peptide 3 (54 aa)
MIFISRFCRQNLSNISSFELRELQVIITCLSRYYHHLHDKWYKSVLFLFVFSCR*

>peptide 4 (75 aa)
MINGTNLCYFSLFSVVDSKLGFIFVSEIRGFHNWELMIGKLVLIGCCPILCSHGVVFSNESVFFFVTILFCLVFL*

>peptide 5 (48 aa)
FLFLFFLSLSLHLSQDAGDHCNPTISLFLVLLHRDIHLSLSLSCSSPS*

>peptide 6 (37 aa)
MELSFPTNLYFFLLQFYFVLSSFDCCYFLGFAVVCRS*

>peptide 7 (34 aa)
MLFLLRLNGEVDTVARMIDVCCVRIGYNYRMEGS*

Sequence

>CNT0042901
TTTCTCTTTCTGTTTTTCCTCTCTCTTTCTCTCCATCTCTCTCAAGACGCCGGCGACCATTGTAATCCGACGATCTCTCTCTTTCTTGTTCTTCTCCATC
GTGATATTCATCTCTCTCTCTCTCTTTCTTGTTCTTCTCCATCATGATATTTATCTCTCGCTTCTGCCGGCAAAATCTCTCCAACATTTCATCCTTCGAA
TTGAGAGAGTTGCAAGTCATAATTACTTGTTTGAGCCGCTATTATCATCATCTGCATGATAAATGGTACAAATCTGTGTTATTTCTCTTTGTTTTCAGTT
GTAGATAGTAAATTAGGGTTTATATTTGTTTCAGAAATTAGGGGTTTTCACAATTGGGAATTGATGATAGGAAAATTAGTTCTCATAGGTTGCTGTCCAA
TTCTCTGTTCTCATGGAGTTGTCTTTTCCAACGAATCTGTATTTTTTTTTGTTACAATTTTATTTTGTCTTGTCTTCCTTTGATTGCTGCTATTTCTTGG
GATTTGCCGTCGTTTGCCGTTCGTAGAACTAGGATTTTGTCGTTGGATTTGTTTGCAATTTTGTTTATTAGTACACTCAGATTTAATTTTATCAATTTGC
TTACAGATTTATTTTGATTGATTACAGTTTTATGTTGGTTAAGTACATATATGTTTGCTTGTTATCGTAAATTTATCTTATGTTTGATTGCAGATTTGTT
TTGTATTTGATTACAGACTTGTTTTGTATTTGATTGTAGATTTATTGTGTCTTACGTTCATGACATAACACTTGTTTTTGTTATGCTGTTTTTGTTGAGG
TTAAATGGAGAAGTGGATACAGTTGCTAGAATGATTGATGTCTGTTGTGTAAGAATTGGATACAATTACCGAATGGAAGGCTCATAGAAGTAACAGAAAC
TAGTCAGTCTTCTTTCCAAGCTAGACTAAAGGATGGATTACAAGAACACACAAAGACATGGCTTCTTTTATGGCTGAACTGCTTTAACACTGGTCCCAGT
AATAAGCAATGCTCTTGGTGGAATTCTTGTTGGCCTAGTTACATCACATGCCGGTGGTAGAAGAAAGGTGATGCATCTTAAAGAGAGACTAGAGGAAGAA
GAAGCAGTGACTAGAACTTTACGAGCTGCTTTTGATGGCTCTATTGTTTCTCTCCCAAGTCTCTCCTCATTGTTTCTTCCACCTCAGTTTTCTGAGCTCT
TTCAAGAATTAGCCATCGTGGAGGCAGAGATTCTTTGTCTAGACAGAAAAATCAAGGAGCAAGCATCTTGTGTAGTTGCCTAGTTGGAAGTCCTCAATAA
TTTGAATTGTATTATAAACATTTTGTGTAATTGCTTGTATTATAAGACATTGTTTTGGAATAATTTAAATTTTTGTTTCTTAAGAACCCAATAGTTCCTA
ATCATTGGAGTGGA