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Detailed information on CNT0043317


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003348, E-value = 2e-18 (V. vinifera)
CNT0032781, E-value = 8e-06 (P. patens)
CNT0000909, E-value = 9e-12 (G. max)
CNT0024020, E-value = 1e-10 (A. trichopoda)
CNT0029963, E-value = 2e-19 (O. sativa)
CNT0011703, E-value = 2e-19 (S. tuberosum)

Expression of CNT0043317

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MLAKVFLVKLIMQCKDWHCFFLYERFCERVWHLMYHVVKSVFVWLCSFVGLYVNHKKKQIHSYNLYK*

>peptide 2 (41 aa)
MVVVNGNENSKPTVSYSEKFLFVFDQKLIVSHLFVSRSWIL*

>peptide 3 (61 aa)
MIGFFLQHRRQWKRESFDLSSQSSLSVAISAVGLWSSSMETRIRSPPCRTLRSFFSSLIKS*

Sequence

>CNT0043317
TCATTCGTAATCTGAGAAGCTTCTTTGTCTTTGATGATTGGTTTCTTCCTCCAGCATCGTCGTCAATGGAAACGAGAATCCTTTGATCTCTCCTCTCAGT
CGTCTCTCTCTGTCGCCATCTCCGCCGTCGGGCTATGGTCGTCGTCAATGGAAACGAGAATTCGAAGCCCACCGTGTCGTACTCTGAGAAGTTTCTTTTC
GTCTTTGATCAAAAGTTGATCGTCTCTCATCTCTTTGTCTCTCGTAGTTGGATTCTTTGATTGGGGGTTTTCTTTCTCGTAGATGGATTCTTTGATTGGG
ATTTCTTCCTCATGTTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCGTGATATATATTTATAAGCAAACAAGATATGTTG
TGGTGGTTACTTCAAGCAATCTTGGTTTGTGGAGCAGAAGCCAGATTCTACAGGACACTTCGTTGATATCATCAGGCTACCAATGCTGGCAAAAGTGTTT
TTGGTAAAACTGATAATGCAGTGCAAGGATTGGCATTGCTTCTTCTTATATGAGAGATTCTGTGAGCGTGTGTGGCATTTGATGTATCATGTTGTTAAGA
GTGTTTTTGTTTGGTTATGTTCTTTTGTTGGTCTATATGTAAATCACAAAAAGAAACAGATACATAGTTACAACTTGTACAAGTAAGCAACAGAAACAAC
AATTAATGAGGAGGTCATCGAATGCATCGATACCTTGAACACATAAATTTTTAGGAACATAT