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Detailed information on CNT0044073


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q93ZJ3|NFD6_ARATH, E-value = 2e-09

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003301, E-value = 2e-06 (V. vinifera)
CNT0002345, E-value = 2e-07 (G. max)
CNT0008805, E-value = 9e-06 (S. tuberosum)

Expression of CNT0044073

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MIAMMMYDELLGRGQRCMQSKTRWMTLVLTIAVSRKIFLRVLRPLLLILKPYLQMF*

>peptide 2 (95 aa)
MSAARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETMLPYHTATASALLNSMLSVSRRGWIVDDCNDDV*

>peptide 3 (41 aa)
MGSYIESPSIVARMHLELELFSDSFKIEGRLCSKIEYSKQLD

Sequence

>CNT0044073
TATCATAATGTTTACTAGCTATTTTTCTCAATATTCCGGTAAAACCAATTAATGTAGAAGAAAACTAGAAATTACGGATTTGACACGTGTCACTTATCCG
CAGCAAGCAACAGTTTCACAGAGCTTCCTGTAGGTGCAGCTGCATCAGATCCCTCCCTTACGCAAAACCCTACGCAAAAGCCCTAAACTCTCTCTTCTCC
AAAAATTGAACAAAAAAATAAAACAAATCCAAAGATCCTACACGTCCAATGTCCGCCGCAAGGTCCGTGTTCCGCTCCGCCGCAAGCCGAGCATCGTCCA
CCGCATTTAGATTCTCCGCCGGACCCAAGCCTATGCCGTCATCGGCACGGACCGCGTTTCGGATGCCTAAACAGAGTCCTCTAACAAATCGCATTTTCAG
ATCTCCGGTAGAACTAAGCTGTTGCGTGGAGACGATGCTCCCTTACCACACTGCCACTGCTTCCGCTTTGCTCAATTCAATGCTCTCAGTTTCACGCCGT
GGTTGGATCGTTGATGATTGCAATGATGATGTATGATGAATTACTGGGGAGAGGTCAGCGATGCATGCAGTCTAAGACAAGATGGATGACTCTTGTTCTC
ACCATTGCAGTAAGCAGGAAGATTTTCTTAAGAGTTCTAAGACCCCTTTTGTTGATTCTTAAACCATATCTGCAAATGTTTTAACTATTTTACTTTATAA
ATATAAAAGTGAATCAGTTTTCATGGGTTCTTACATCGAATCGCCTTCTATTGTAGCTCGTATGCATTTGGAATTGGAACTATTTTCTGATTCTTTTAAA
ATTGAAGGGAGATTATGTTCCAAAATTGAATACAGCAAGCAGCTAGAT