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Detailed information on CNT0044865


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P0DH91|ARF2B_ARATH, E-value = 8e-23

BLAST vs NONCODE (A. thaliana):
NONATHT000730, E-value = 0.0

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005353, E-value = 1e-08 (V. vinifera)
CNT0001084, E-value = 1e-17 (G. max)

Expression of CNT0044865

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGQFSSSKHK*

>peptide 2 (31 aa)
MLFYVFLMAGLNFAISDLERSIIFVPCYITFF

>peptide 3 (75 aa)
WGFHLQSFSAGFSPRRRCASLWWVLMLLVRPPFCTSSSLVRLSPPSPPLVSSLLLNTNNCYIISFPLLYHHSSVA*

>peptide 4 (60 aa)
MIYRPLLLSFAISLAHKPENQHSPIDLFRYIQITCATTGEGLYEGLDWLSNNIANKVSTF*

Sequence

>CNT0044865
ATGGGGCTTTCATTTGCAAAGCTTTTCAGCAGGCTTTTCGCCAAGAAGGAGATGCGCATCCTTATGGTGGGTCTTGATGCTGCTGGTAAGACCACCATTT
TGTACAAGCTCAAGCTTGGTGAGATTGTCACCACCATCCCCACCATTGGTCAGTTCTCTTCTTCTAAACACAAATAATTGCTACATCATCTCATTTCCTC
TGCTCTATCATCATTCATCAGTTGCATGATTGCTTATGGTAGCATGTACTAGTAATAATAACCTCTACTGAGTACTTTCTGTTTCCTAGTAGCAGACCAT
GTTGACCGCTGTTACCGCTGTTCTAAACAGACTTGTCTGAGTCTGATTAGCATGATCATCTAAGGCTCCTATATACTTGGCTGGCCTTATCAATGTTTCT
ACCTTGCAGGATGAGCTTCGTGATGCAGTACTGCTTGTGTTTGCCAACAAACAGGATCTTCCAAACGCAATGAATGCTGCTGAAATAACTGATAAGCTTG
GACTCCACTCTCTCCGGCAGCGTCACTGGTAAGCATCATGATCTATCGACCTTTGTTGCTTTCCTTTGCTATTAGTCTAGCTCACAAACCAGAGAACCAA
CACTCTCCGATTGATCTCTTCAGGTACATACAGATCACGTGCGCCACCACCGGTGAGGGACTGTACGAAGGCCTGGACTGGCTCTCCAACAACATTGCTA
ACAAAGTAAGCACATTCTAAAATTATAAATATGGGAACAAAGGTTTATTAACATATCGGTTTTGAAACAGTCATAGATAGACCTTTTTCTCTATCTCCTA
ATCCACACTATGATAATAATATAACCAAAGTTTTGTAGTCATTTTGTGGTCATATTTTGATGTTGTTCTATGTTTTCTTGATGGCAGGCTTGAATTTTGC
GATATCGGATTTAGAGAGAAGCATTATCTTTGTTCCTTGTTATATAACCTTCTTT