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Detailed information on CNT0045095


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P0DH96|CALM4_ARATH, E-value = 2e-82

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0001037 in G. max

Most similar lncRNAs:
CNT0003478, E-value = 1e-07 (V. vinifera)
CNT0034279, E-value = 3e-08 (P. patens)
CNT0001037, E-value = 4e-41 (G. max)
CNT0028858, E-value = 1e-07 (O. sativa)
CNT0013596, E-value = 4e-07 (S. tuberosum)

Expression of CNT0045095

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MAKLCSGYETVLVFVEHPESFFQLFLRVCVLHLFSH*

>peptide 2 (76 aa)
MKPFWSLSNTLKASFSSSSESVSFIFLAIRFKNSGKSMVPFPSASTSLIMSCSSASVGFCPSDRITVPSSFVVMQPV

>peptide 3 (29 aa)
FFFFFFFFFCRNLNMPLCQRERNQQNKKR*

Sequence

>CNT0045095
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCGAAATCTAAACATGCCATTATGCCAACGAGAAAGAAACCAACAAAATAAAAAAAGATAAGTCACAAAT
TCAGTCTGTTAAAACCTTAAGAAACTACTAGGCTCAAATCAAACCCAAGACATTAAAGGTCGAATCATTCTTTTGTAGATAGTAAAAGCCTAAAAGGTCA
TCACATCACCACTTTTATTCTTCATTTTTTTCTTATCATCATCACTTAGCCATCATAATCTTGACAAACTCCTCGTAGTTTATCTGACCATCTCCATCAA
CATCTGCTTCACGAATCATCTCCTCGACCTCTTCATCAGTCAGTTTCTCACCTAGATTCGTCATCACATGGCGAAGCTCTGCAGCGGATATGAAACCGTT
CTGGTCTTTGTCGAACACCCTGAAAGCTTCTTTCAGCTCTTCCTCCGAGTCTGTGTCCTTCATCTTTTTAGCCATTAGGTTTAAGAACTCAGGGAAGTCA
ATGGTTCCGTTTCCATCAGCGTCAACCTCGTTGATCATGTCTTGTAGCTCAGCTTCTGTTGGGTTCTGCCCTAGTGACCGCATCACTGTTCCCAGCTCCT
TTGTGGTGATGCAACCTGTT