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Detailed information on CNT0005031


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q94F62|BAK1_ARATH, E-value = 6e-32

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0000466, E-value = 6e-24 (G. max)

Expression of CNT0005031

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLRGTANPLQRIQIQGYGFPFLGNSGEFLV*

>peptide 2 (33 aa)
FPFIFPTTYFQFSNHFLHPSPPLPPLTLPLRHC*

>peptide 3 (49 aa)
MQIYPVNWFHSLVSLQICNICESYFYNEICLPYLFDVQAYMLVIFYVPF*

>peptide 4 (32 aa)
MFCKVGMLPLSILANGFMLHATVTIVLQELIL*

>peptide 5 (78 aa)
ISFHFPNHLLSIFQPFPSPFATIAPFDTPSPPLLTTTLLLSYLPLPQFSPANSTSTNIGSFSRKIPGLFHLGLFVRPV*

>peptide 6 (97 aa)
MEPGVFGSVFVSLIIVFSAFLRVSGNSEGDALNALKSNLEDPNNVLQSWNATLVNPCKWFHVTRNSHNSVTRVDLVNANLSGQLVPQLGQLTNLQYL*

>peptide 7 (46 aa)
MFQEVHPNENKCLSRNMKCCQSFFDQHIGFLTSALSYMFILVILIG*

>peptide 8 (47 aa)
MKFVCHICLMFKHICLLSFMFPSDRFSPHYSQSHKLQGFHFCVFISH*

Sequence

>CNT0005031
ATTTCCTTTCATTTTCCCAACCACTTACTTTCAATTTTCCAACCATTTCCTTCACCCTTCGCCACCATTGCCCCCTTTGACACTCCCTCTCCGCCATTGC
TAACCACTACTCTCCTCCTCTCCTATCTCCCCCTCCCCCAATTCTCTCCTGCAAATTCAACTTCAACGAATATAGGTTCATTTTCCCGGAAAATCCCCGG
ACTTTTTCATCTGGGACTATTTGTTCGGCCAGTGTAACCAAACTCTCCCTCTATGCTCCGCGGCACCGCCAATCCTCTCCAACGCATTCAAATTCAAGGA
TATGGCTTCCCTTTCCTGGGAAATTCCGGGGAGTTTTTGGTCTGAAGACTTTCTGTTGGGTGAGTGTTGACTTGAGTTGACCCACAAAGTGCCTGTGCGT
GAGAGGGTGGTTGATGAAGAGTTTGGGGTGCTAGCTGCGGAGAGGTGGCGGTTATGGAGCCGGGGGTCTTCGGTTCGGTTTTTGTTTCCTTGATTATAGT
ATTCTCTGCGTTTCTGAGGGTCTCTGGTAATTCCGAAGGTGATGCTTTGAATGCGTTGAAGTCAAATTTAGAAGATCCTAACAATGTTTTGCAAAGTTGG
AATGCTACCCTTGTCAATCCTTGCAAATGGTTTCATGTTACACGCAACAGTCACAATAGTGTTACAAGAGTTGATCTTGTAAATGCAAATTTATCCGGTC
AACTGGTTCCACAGCTTGGTCAGCTTACAAATTTGCAATATCTGTGAGTCATATTTCTATAATGAAATTTGTTTGCCATATCTGTTTGATGTTCAAGCAT
ATATGCTTGTTATCTTTTATGTTCCCTTCTGATCGCTTTTCCCCCCATTACAGCCAAAGCCATAAATTGCAAGGTTTCCATTTCTGTGTTTTTATTTCTC
ATTGATATGTGGTAATATTTTTATGAGCTTTACATTAGTTTCTTGTAGAAATATGTAGCCTTGGTCCTTAGAAGGGAAAATAAACTTCAACAATTCTATT
GGTTACTTCAGAATTTTTGCTTCGATAATAATAATAATAATAATAATTTCTTCAATAAAGAAGCATGTGGTTCAGTGTTCAGTTGCATCAAGTTTTCAGG
GGACAAATATTCTCATTTGTTCTTCTTATGCGTTCATGACTTACATTAAGAATTCATATTTTTCCTGGTTACAGATTCTGTCCCAACATTAAGGTTTCAC
TTAGAGAAATGAACTTCAAGAGCTTGTTTGGCTGTGTTTCACATTTTATGTTTCTAATAGTGTTTTAATTATTTGCTTGTGATATCTGTTTTCTTCAATT
TGCCCTTTTTCTAATCTTTCATGTTTTACATATTAACACTCTACATTGCTTTGTATTCATCAAATTCACCTGATATGGCATTTTGATTTCCATTTTCTAA
ATAGAACATGTTTCAAGAAGTGCATCCAAATGAGAACAAGTGTCTTTCTAGAAACATGAAATGTTGTCAATCTTTCTTTGATCAACATATTGGTTTCCTG
ACCTCTGCTCTATCTTACATGTTCATTCTTGTCATTTTAATCGGTTAGATGTTGTCATGTTATATATTCTGAACTT