« Back to Vitis vinifera search


Detailed information on CNT0005833


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0042639, E-value = 2e-21 (A. thaliana)
CNT0018989, E-value = 3e-20 (Z. mays)
CNT0002995, E-value = 6e-31 (G. max)
CNT0022204, E-value = 2e-30 (A. trichopoda)
CNT0031477, E-value = 1e-22 (O. sativa)
CNT0011141, E-value = 5e-28 (S. tuberosum)
CNT0037993, E-value = 2e-15 (S. moellendorffii)

Expression of CNT0005833

Peptides detected in this lncRNA

>peptide 1 (36 aa)
WSPSPINIKEGASGSYIQSWGFVIGLLSQRASRHES*

>peptide 2 (54 aa)
MEMDCSFSILLETLFYEMPMEFWLLGFRVLLMLRMITLRQSFSFVYSNMLSKGL*

Sequence

>CNT0005833
TGGAGCCCTAGCCCTATAAATATCAAAGAAGGGGCGTCTGGTAGCTATATTCAGAGCTGGGGATTTGTAATCGGCCTGCTGAGTCAAAGAGCGAGTCGCC
ATGAGAGCTAAGTGGAAGAAGAAGCGCATGAGGAGGCTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCAAAGTAGAGGTTTACAAGGACAAGAAGAT
AGACCTTCCCTGATATGCCTTTTTGTCTTCATAACCTGCATTCGTGACCATGCGGGCTTGTGAGGATCGGAAGATTGATGGAGATGGATTGTTCTTTTTC
TATCTTATTGGAAACCTTGTTCTATGAGATGCCAATGGAGTTTTGGCTTTTAGGCTTTAGAGTATTATTGATGCTTCGGATGATAACGTTGAGACAGTCA
TTTAGTTTTGTTTATTCTAATATGCTTTCAAAAGGTTTATGAAACTTGAAGAAGATTGAACTCTTGGATGGATCATTAAAAATGAATCTCTGATCTGAAC
ATCTTAGAAATATCTTTTATGTGCTGCAAATGGTGCAAGGATTTTTCATTAAATCTTAACAAGGGGGTGGATGATTGATGCTTGTGAGCTTTCGG