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Detailed information on CNT0006382


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0043564, E-value = 2e-17 (A. thaliana)
CNT0035158, E-value = 6e-11 (P. patens)
CNT0021574, E-value = 2e-17 (Z. mays)
CNT0000126, E-value = 4e-18 (G. max)
CNT0022384, E-value = 1e-18 (A. trichopoda)
CNT0024802, E-value = 1e-18 (O. sativa)
CNT0010786, E-value = 6e-11 (S. tuberosum)

Expression of CNT0006382

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAFSWKACGVVPLLFSILFWSSLSHHMLFFP*

>peptide 2 (45 aa)
MDSNMDDSTRTSTPTGKIILIYKDPFFKVFVNWLCVFVQKKIFLN*

>peptide 3 (31 aa)
MPSIKRHGHKGKSTKYWLVFKIWLEGFKNNL*

>peptide 4 (29 aa)
QIIASEGYMEGKHYLVSSLSCNHGCSNIT*

Sequence

>CNT0006382
CAGATTATAGCAAGTGAAGGTTACATGGAGGGGAAGCACTATCTCGTCTCATCTCTTTCCTGCAACCATGGATGCTCCAACATCACTTGAAGAGTTAATT
ATATGCCTCTTGGCAGCTTTTGCTCTCAAGTATTTCTCCCTTCATCATTCGTGAAGGTGAAGGTGAAGGTGAAGGTATTGTAAGTTTATATATAGTATAA
TTTTTTGAATTATTGATCGCAATTCACAACATGTACAGTTGAAACCAATGCCAAGTATCAAAAGACATGGTCATAAGGGCAAAAGCACCAAGTACTGGCT
TGTTTTTAAGATTTGGCTCGAAGGGTTCAAAAATAACTTGTAGAAATTAACATCTCAATATGGATATATATATATATATATATATATATATATATATATA
TATATATATCCACAGGGAGGCTTTTTCACATTAAATAACATGGGTATGCAAATAACCTTGAAGAATATTTGTGGTATCTCAAACTGCACTTGAAGTCACG
AGGTTACATTGGATATAAAATTGCGTGGACGGTGGTTGTTATTTGTCACTAATATTTATTGTATGTATATGATGGATTTCTTTTTCAACTTTTAAAATTG
AGAAGAAGAAGCAGCAACGGCGCCCACTGGCCACGCCTGTAGTGGCACACAAAGCAACGCACCCGCACCCTTTGATCATTGATCATGACAACAGTCGTGC
CTCGTACGTCCCACAAGTCCTCCAACTTCATAACATAAGACAGCTTGGTGCGGGTCCATGAGCATCAGCATCGCAAATGGCTTTTAGTTGGAAAGCGTGT
GGTGTGGTCCCTTTGCTTTTCTCTATCCTTTTCTGGTCCTCCCTTTCCCACCATATGCTTTTCTTCCCATGATGCCTCCACTATGGACAGTAATATGGAT
GATTCTACAAGGACATCAACTCCTACCGGGAAAATTATATTAATCTATAAGGACCCATTTTTCAAAGTCTTTGTAAATTGGCTTTGTGTTTTTGTCCAAA
AGAAAATATTTTTGAATTGATTATTGTATTATCCATATTTAAAAATAAATGCATTTTTTGAAAGGATGTTTTAGTTTCTTTTTTGTAATCAAATGTGAAT
GAATCATAAAGTTGAGAAAAGCATAGCATACATGATTGATCAATGAGGTAGACAATTTTCTTAGATCGGGACTTACATGCAGATATTTAATAGTCGATGA
GTTTTAACCTTAGACTATTGTAATATAATAAATCAATAACTCATTGAGTATTAGCTAAATCAAGA