Detailed information on CNT0007384


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9FH37|ILR3_ARATH, E-value = 4e-18

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0042615, E-value = 2e-09 (A. thaliana)
CNT0035188, E-value = 2e-09 (P. patens)
CNT0020781, E-value = 2e-09 (Z. mays)
CNT0002871, E-value = 2e-09 (G. max)
CNT0023432, E-value = 3e-11 (A. trichopoda)
CNT0029639, E-value = 8e-12 (O. sativa)
CNT0008755, E-value = 7e-09 (S. tuberosum)
CNT0038248, E-value = 1e-10 (S. moellendorffii)

Expression of CNT0007384

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MFSSHTTSVKRSRGKKNFCRNIITYKCSSCKYQNLQLFSFI*

>peptide 2 (40 aa)
MLYCNGIKHRSSVTIPTTNKMNSYMPFPGVIFLHIIQIHR*

>peptide 3 (43 aa)
MHHSHIERKNVIDISETTKEVNEKFKNVKEVYDTFLFCHEKTY*

>peptide 4 (35 aa)
MLQLQISELAIVFFHLNCICSHKQTQTQKVINKIK*

>peptide 5 (44 aa)
MYFKEVQKLRILPISTMFSKIFLKALVLNLALNQLLNDNLLSYN*

>peptide 6 (40 aa)
MIRKHMSLFCKTRVCFAKQEFILLSCNKIDETIKALKNKK*

>peptide 7 (29 aa)
MPNPSEIKVQGVEPNRAYAQQHLNKSDPN*

>peptide 8 (34 aa)
MNPCSKYQHPVFFKLYNQSGTSDVKIHVKQGSLR*

>peptide 9 (35 aa)
MPVIQPIPPYFLPTCFGARCAAQSRPHPVAESDMN*

>peptide 10 (58 aa)
MPDLLPTVTNNILHRAENFHPLWGLQMVLNDIRGTIRVPCFLNGCKLLTLKANKVFQA*

>peptide 11 (58 aa)
MRERERERERESIVEHACHSAYPSVLSPDMLWSQMRCTVQTSSCSRIRHELMEQQIKM*

Sequence

>CNT0007384
ATTGCAGGCAGACCTTCAATTCATTGATCTTCTCTTGCAGATCCTCACATGATTTCTTCAGCTTCTGTCCTTCACTACGCAGCTGAGTCATCATTCTAAG
AGCATCACTTAATATAACAGCCTTGTCCATTTTAGGGGGTCTTCCAGGCTCCAGGATAGAACCCAATTCTAGGAACCTTTAGATGAAGCCAAAATTCAAC
ATGAGAAAGACTGAGAGATGAATCCAAAATAAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATAGTAGAGCATGCCTGTCATTCAGCCTATC
CCTCCGTACTTTCTCCCGACATGCTTTGGAGCCAGATGCGCTGCACAGTCCAGACCTCATCCTGTAGCAGAATCAGACATGAATTGATGGAACAACAAAT
AAAGATGTGAGAAGCAAAGAACTAATAAATTGTTTGCCACCTATCTAATTTGATAGCACAGATATAATTGTGCAATATAAATTTGAAGCTACTAAATTGG
AAGTCAGAAGAAAACTACACCAAGAAAACAAATGTAGAAAATATGCTGTATTGTAATGGGATAAAGCATCGGTCTAGTGTAACTATCCCTACCACAAACA
AAATGAATAGTTACATGCCTTTTCCGGGAGTGATTTTCCTTCACATCATCCAAATTCACAGGTGAGTCATCAAATTCCACACTGAGAAAAATGATAAGAA
AACACATGAGTCTGTTTTGCAAAACAAGAGTTTGTTTTGCAAAACAAGAGTTTATTTTGCTCAGTTGCAACAAAATTGATGAAACCATTAAAGCATTAAA
AAATAAGAAATAAAGAGGGGTAAAAACAGTAACAAGAGAAGAACAGCACAATCATGTAGAGATAATCTTTGAAGTTGGCAAATTCCCTCTAAGAGATGTT
TAGTTCTCATACTACCTCAGTAAAAAGGTCTAGAGGGAAAAAAAATTTCTGCAGAAACATAATCACATACAAATGCTCCAGTTGCAAATATCAGAACTTG
CAATTGTTTTCTTTCATCTGAACTGCATTTGTTCGCACAAACAAACCCAAACCCAAAAAGTAATAAATAAAATAAAATGAAATAACTTTACAACTAACAT
TCATTGACCAGAGCATTAATACAGGAGAAAGAACCATTTGAATATGCAAGCATTCAGATTTCCTGGTTATCCTGAAGGCTAAAGAAAGATAAAGCTGAGC
CATATTGAATCCTTTATTAATCATAATGTTTCAAGTTTCATTCTTTTATAATCATCTATCTAATCTATAGTCAGCAGATATAAACCAATAATTGGTAAAT
AACACAGATAAAACTGTCATCACATTGGTAGATATCACCGTTTTATGTACTTCAAGGAGGTTCAGAAATTGAGAATATTACCAATCTCTACTATGTTTTC
TAAAATATTCCTAAAGGCCCTGGTCTTGAATCTTGCCTTAAATCAACTGTTAAATGATAATTTACTTTCTTATAACTAACTTTACTATTTAGGTTGATAA
TCAAAATGAGGGTAAAAAATTGTTTTACTTAACTTGCATTGACCAGAAAACTCAGATCAGGAAGAGAAGTGATGCATCATAGCCATATAGAGAGAAAGAA
TGTCATTGATATTTCAGAAACCACAAAGGAAGTCAATGAAAAATTCAAAAACGTGAAGGAAGTATATGACACATTCCTTTTTTGTCATGAGAAAACATAT
TAGGCATATGAATATTAAAAACGTTATTTTTTAAGGTGGGATCCAGAAAAGCATGCCAGATTTACTACCAACAGTAACTAACAACATTTTGCATCGTGCA
GAAAACTTTCATCCACTTTGGGGGCTGCAGATGGTGTTAAATGATATTAGAGGAACTATAAGAGTTCCTTGTTTTTTAAATGGTTGTAAGCTGCTTACTC
TGAAGGCAAACAAAGTATTTCAAGCATGAATCCTTGCAGCAAATACCAGCATCCTGTCTTTTTCAAGCTATATAACCAGTCAGGGACGTCTGATGTCAAA
ATCCATGTAAAACAAGGTTCCTTGAGGTAACTCTGAACCGAACCAAAAGGATAAATGCCGAACCCAAGTGAAATAAAAGTGCAAGGAGTAGAGCCAAACC
GAGCCTATGCCCAGCAACACTTAAATAAGAGTGATCCAAACTAGTGAAACTTCAGAACAATTTAGCTTATATACACTGGAACAGCCAGAGTCACTGATAA
GCAGTGGATTGGATGTGTATCATTTGTATTTTCATAGAGTTCCAAAAAGAAAACTCTCTCTGGAGAATGTACAAGAACTAATAACCGAACTAGTTTTCAT
GGAGGCTTCAACAATCTGAAATTGTTCTTATAAAGGGCAACTGAAAATAGTTATTTCAGCAACACAAGCATTTACGCAAGACTTACAAGATCCAAATCAA
AGCAATTCCATAAAGCTTGGCGGAAATAAGCAATTTGCCAATCCTAAAACCTCAGATCATCACTTATCCTTGCTCTTCAAACACCTAAAAATTATTGATT
AGAAAAAATGACAGCACTCTCAAATTGGAAAAAGTCTTGGGCTTTC