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Detailed information on CNT0007870


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P46291|RL38_SOLLC, E-value = 1e-40

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0001321, E-value = 3e-26 (G. max)
CNT0022119, E-value = 4e-19 (A. trichopoda)
CNT0027917, E-value = 1e-22 (O. sativa)

Expression of CNT0007870

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MEELMCPLHPRLIRRYSGIRRTFVFLHHFLILSNI*

>peptide 2 (37 aa)
MHDLSRSRRTRIWLSSRFAAPSTCTHCVCQTLRRLTS*

>peptide 3 (68 aa)
PKQIHEIKDFLLTARRKDARSVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSLPPGLSVQDL*

>peptide 4 (31 aa)
AEANPRDQGFSPNSKEEGCTICQDQEEQGYG*

Sequence

>CNT0007870
GCCGAAGCAAATCCACGAGATCAAGGATTTTCTCCTAACAGCAAGGAGGAAGGATGCACGATCTGTCAAGATCAAGAAGAACAAGGATATGGTTAAGTTC
AAGGTTCGCTGCTCCAAGTACCTGTACACACTGTGTGTGTCAGACTTTGAGAAGGCTGACAAGTTGAAGCAGTCACTTCCTCCAGGTTTGAGCGTTCAAG
ACCTTTGAAGATGGAAGAGTTAATGTGTCCCCTCCACCCTAGATTGATTAGAAGATACTCGGGAATTCGAAGAACTTTTGTGTTCCTTCACCATTTTCTT
ATCCTGTCGAATATTTGAAGTTTTGTTCATTCTAGATATGGTGTTTCTTTTTCAATCTCCACCTTCGACCTTATTTTGTCGAACCCTTGTGGTGTTTGGA
TATCGAAATTTTGGTTGATTTGCATGATGATTTCAATTTCCTTGGTATAATGTTATCTTTAACTTTTTTCAAAGAA