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Detailed information on CNT0007969


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O23685|AP1S2_ARATH, E-value = 5e-72

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0021851, E-value = 7e-12 (A. trichopoda)

Expression of CNT0007969

Peptides detected in this lncRNA

>peptide 1 (142 aa)
MIHFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGMILSRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHFVEILDRYFGSVCE
LDLIFNFHKVVSESAPLLVEISARTLSPERWVEYNNPQTADG*

Sequence

>CNT0007969
CAGAAATCCAAATCTTAGAAAACACAAACTAGTAAAGAAAAAATAAAAGACTGTACAGAAAATACAGTATAGAAATAATAGGAACACAAAATCCCCCAAC
TCCAATTTCACCTCGCAAGAAGAAGAAGAAGAAGGAGGAGTTGTTTGTACCTTGGATCACCAGCCATGATTCATTTTGTTCTGCTCATTAGCCGACAGGG
AAAGGTGAGGCTAACCAAGTGGTATTCACCATATACACAAAAAGAGAGAACCAAGGTAATCCGTGAACTAAGTGGTATGATTCTCAGTCGAGGACCAAAG
CTTTGCAATTTTGTTGAGTGGAGAGGATACAAAGTCGTTTATAAAAGATACGCAAGCTTGTATTTCTGTATGTGCATAGACCAAGAGGACAATGAGTTGG
AGGTCCTGGAAATCATACACCATTTTGTTGAGATTCTGGACCGATACTTTGGAAGTGTCTGTGAGCTGGACTTGATCTTCAATTTTCACAAGGTGGTATC
TGAGTCAGCACCTCTCTTGGTAGAAATATCAGCGAGGACGTTGAGTCCCGAAAGGTGGGTTGAGTATAACAACCCTCAGACCGCTGATGGTTGA