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Detailed information on CNT0008214


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0001826, E-value = 3e-10 (G. max)
CNT0032285, E-value = 5e-09 (O. sativa)

Expression of CNT0008214

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MLMLSSKSFFQQILLSFYSTMMVMLMGGKTSNGVKMPFTLLLTIRQNGGLPRDFYILQLFQSMITFSFGMKIWVWRISILEGTLK*

>peptide 2 (403 aa)
MAVFLLKKRSVLLDGGTCGLKMRQLPFMWIICIVMLFIVYRTTNYQYQQTEMESRLDPFYSSKDSSMDMRSLHSLPRGIIQARSDLELKPLWSTTSSKSK
ASNSSSHNLLAVPVGIKQKSNVDALVQKFLSANFTVILFHYDGNVDGWEDLQWSKDAIHIVAHNQTKWWFAKRFLHPAVVSIYDYIFLWDEDLGVENFHP
GRYLEIVKSEGLEISQPALDPNSTGIHHRITIRSRTNRFHRRVYDIRGSTKCSAESEGPPCSGFVEGMAPVFSRSAWLCAWHLIQNDLVHGWGMDMKLGY
CAQGDRSKKVGVVDSEYVVHQSIQTLGGQSLKRDSNPEESVKRHVVDVRSEIRRQSTYELQIFKDRWERAVKLDKNWADPFKASQRRRQLYKQRQKSKVK
KLR*

>peptide 3 (31 aa)
MGTNKSFIGFMSCNLFFFLGPMNLMISSLHI*

>peptide 4 (53 aa)
TFQQFRLSQRLFLLPNPPSSLTPPHLYPSTPTATLVHFFQYLYCIYMLTYTYT*

Sequence

>CNT0008214
GTACTTTCCAACAATTTCGTCTCTCTCAAAGACTCTTTCTTTTGCCTAACCCTCCTTCTTCTTTAACCCCACCCCACCTATACCCCTCTACCCCCACTGC
TACCCTTGTCCACTTCTTTCAATATCTATACTGTATCTATATGCTTACCTATACATATACATAGATTTGTCCCATTTTCTGTTCTGTTTTGCTGATAAAG
ACTTGAACTTGTTCTTCAAAGGTTCACTTTTTTTCCACTTTTCAAGATTCTGGAGCTGTTGGGTTGCTCTTTTGCTCCAAACCCTTGTTGGGTTTTCAGT
TCTTGAGTGTTCGATGAGAACTTTCTCTGTTTCATATTCGCCTGCAACAGGCAATTAAATTATGGCGGTGTTTCTGCTGAAGAAAAGGAGTGTTCTCCTT
GATGGGGGAACATGTGGATTAAAGATGAGACAGCTACCATTTATGTGGATCATCTGTATAGTTATGTTGTTTATTGTATATAGGACCACCAATTATCAGT
ATCAACAGACAGAGATGGAGTCAAGGTTGGATCCATTTTATTCTTCAAAGGACTCTAGTATGGATATGAGAAGCTTGCACAGTTTACCGCGTGGTATTAT
CCAAGCAAGATCAGATCTGGAGTTAAAGCCTCTTTGGTCAACAACTAGTTCAAAGTCAAAGGCTAGCAATTCTAGCTCTCATAATTTGTTGGCAGTTCCA
GTTGGCATTAAACAGAAGAGTAATGTTGATGCTCTCGTCCAAAAGTTTCTTTCAGCAAATTTTACTGTCATTCTATTCCACTATGATGGTAATGTTGATG
GGTGGGAAGACCTCCAATGGAGTAAAGATGCCATTCACATTGTTGCTCACAATCAGACAAAATGGTGGTTTGCCAAGAGATTTTTACATCCTGCAGTTGT
TTCAATCTATGATTACATTTTCCTTTGGGATGAAGATTTGGGTGTGGAGAATTTCCATCCTGGAAGGTACCTTGAAATAGTAAAATCTGAAGGACTGGAA
ATTTCTCAGCCAGCTTTAGACCCGAATTCAACTGGTATCCATCATAGAATCACAATACGAAGCAGAACAAATAGGTTCCACAGAAGGGTCTACGATATTA
GAGGTAGTACAAAGTGTTCAGCTGAAAGCGAAGGTCCCCCATGCAGCGGATTTGTGGAAGGAATGGCTCCTGTCTTTTCCAGATCTGCGTGGCTTTGTGC
CTGGCATCTTATACAGAATGATCTTGTTCATGGATGGGGAATGGACATGAAACTTGGTTATTGTGCACAGGGAGATCGATCCAAAAAGGTGGGAGTAGTT
GATAGTGAATATGTAGTGCACCAGAGCATCCAAACTTTGGGCGGACAATCTTTGAAAAGGGATTCAAATCCTGAAGAGTCTGTGAAGAGACACGTTGTTG
ACGTGCGATCTGAGATTCGGAGACAATCAACTTACGAGCTGCAAATATTCAAGGATCGATGGGAACGAGCTGTGAAGCTGGACAAGAACTGGGCGGATCC
ATTTAAAGCTAGCCAGAGACGTAGACAGCTGTATAAACAAAGGCAAAAATCAAAGGTTAAGAAGCTCAGATAAGGTTCATAGGTTTATCTCAAATCCAAA
CAATGGGGACAAACAAAAGCTTCATAGGGTTCATGTCTTGTAATTTGTTCTTCTTTTTAGGCCCCATGAATCTCATGATTAGTTCATTACATATATAGGT
TTAGTTTCTCCTAATTTTTATACTGAATGTATTTAATAATTTTCTTCTTTCTCCACCTTTCTTCACTTCTCTTTATGTACATCATTTTTTTTTGTAACTA
GCCTTGGGTTAACACAATGTTTCTTTTGATTTTAACTTCCTTTTTTT