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Detailed information on CNT0008455


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P92543|M1110_ARATH, E-value = 4e-07

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0002281, E-value = 1e-56 (G. max)
CNT0028376, E-value = 8e-58 (O. sativa)

Expression of CNT0008455

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTGQVGDGWNQSEVQIAQAKPRNGPQRND*

>peptide 2 (33 aa)
MKWERKKRTEPSDTSNKVGLCHFEQENSRFRNK*

>peptide 3 (34 aa)
MAGTNQKCKSRKRSRETDRSATTRTRVGGVLSVS*

>peptide 4 (49 aa)
MGEISFCISRIQNLLANSIVPFSDTIDLANEMVIFHFTIAGTSLAFSAS*

>peptide 5 (39 aa)
MISARAARRTTIVSLVTTRVELSQRVWYSSLSLLCQWLG*

Sequence

>CNT0008455
AAAATGATCTTTTGCTATCTTCTTTATGGAGAGCACATGAAAATGTGCCTTCAGTTTAGATACTTTCCCTCAATACTATAAATATAGCACACTAGATGAA
TGAAATGGGAAAGGAAAAAACGAACAGAACCAAGCGATACATCTAATAAAGTGGGACTATGTCACTTTGAACAAGAAAATAGTAGGTTTAGGAATAAATA
GAATAAGTGTAACAAATTGTAGCTTACTCATGAAGTGGTTATGAACATATAATGTGAAATAAGAAGCCCTTTGGAGAAAGATGATTACAAAAGTGTGGGG
TAGAAAAATTTAATGGTGCATAAATAATTTAATGTACGGTCTTTTCCAAGAGGAACTGCTTCTCCAGGATACCCAAAAGAGTGGGAGGTGCCTGGGCTCG
TTCCTCCCGATAAAATAGAAGGACAACCGGTGTTGAAGCTCCGCTCTCCTTTGGATATCAGGAAGGAGAGGGCGTTCTAATTCCGGAACCAGAACGGCGA
GTGAAACCCCAAAACCTCAAATCCCCTAATGCCTATCAAATAAGAGTCCTACCGAGGATCCGGTGTCTAAGGTGTCTAGGATTTCTCCCAAAAGTAAGTA
GGAGTGCTCTTCCTTTCAAGCCTTCTGCCACGGCTTTCGCGCTAGCGCGCTTAATCAATCCGATGCTTCTTTCCTAATCCCATCGGCCATAACGTGGTCT
ATCTGGGTTGGTCTAACTCCTTGGCTTGGATATGGTTATTATTCCCGGGTCACAGTAAGAAAGGATAAGCTATATATAAATAGGAGGCTACCCTAAAACC
CTAATCCATGCCTATATAAAATAAAGGGGCTACATATTCTCTTTGGAGGCATCTTGAAAATTCCATAACATCTTGGAAGATTCACAAGGAGATCAAGACA
TCGACTACATCGTCTTCGAACTCACCTTCTTTTTTCTATTTCATAGCCTCTTCCGTATTCTCAATCGGAATAGCCAGGCCAACAATCTTTTTCTTTTATT
AGGAACCGAATCCGAAAGAGACGCAGCAGCAAGAGGTCCTGAATCAAATAGAGCAAGCAAGTCCGTCTGACCGGCGATTACTAGCGATTCCGGCTTCATG
CAGGCGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGGGATCGTGACCCTTTGTCCCGGCCATTGTAGCACGTG
CTTTGAGAGAGATGGGAGAGATATCTTTTTGCATATCTCGTATCCAAAACCTCTTAGCAAACTCAATTGTTCCATTTTCAGATACTATTGATTTAGCAAA
TGAAATGGTGATCTTTCACTTCACCATAGCAGGAACCTCACTAGCCTTCTCGGCCAGTTAGTCTAACCACAGGGATCCCTTCCTGCTTATCCACCCATTG
CATTCCATCGTCTTGTATTGTACTGTGCCGTATCAGACCAGATAGATCTATTGAGTGAGAGAAAGGGAGAAAACTCTAATTAGATATTCTTTTTCTATTG
ATAGGGATCCCCATTCATTCCTAGATTCCCGTCACTACGGACTTATTGTCCCTACCTAACTACATGGTAGTGGTCTAGGGAGCGCAATTGCTAGAGCACG
GGAGAATTAAGAGTAATGATTTCAGCAAGAGCAGCCAGACGGACTACTATAGTGAGTCTAGTGACTACTAGAGTAGAGTTAAGTCAAAGGGTATGGTATA
GTAGCCTTTCGCTCCTATGTCAATGGTTGGGATAGCTGGCTTACCTTCTTAGTTAGGACATTCAAGCTTCCAGTCTAATGACTGGACAGGTTGGGGATGG
CTGGAACCAATCAGAAGTGCAAATCGCGCAAGCGAAGCCGAGAAACGGACCGCAGCGCAACGACTAGGACTCGTGTCGGAGGAGTTTTGAGCGTGAGCTA
ACACTCATGCAGCGGCTCATTTGGTCTGCGCGGTCAAATCGGCTCTTTCAGGTGATGGAAGAAAAATAGTATTCTGGCACCACAACTGAAAAGGTCACCT
ACTTTTATTTCAAGTTCTTATGAAGTAAATTCCTTTGTGATTCAAAGATGTTTGATATATCATATACTTGCCAATTAGTACTTTGGATTCTTGCTCACTA
ATAATTATATTCTGACTGAGGTAAGGTGATCGAATAACAATCAAGGTCTAAAACATAACAACAAGCAGGCTAAACTATGAGAAGGGTTGATTTCGGATTC
TCATAATTTTGAAGTCCTTCAGATTTAAGTACTTAGGATTTTCAACACGCGTTCCGTTGAGATCATATCATCCGTTCGTCAGATTTAGGTGAGACCTCCT
TGCTTTCGTACACCTCCAGTTTAATGGTTTGTTAGTAGTAACATTTTGAGGTTCCCT