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Detailed information on CNT0009014


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q5M757|ZDH15_ARATH, E-value = 6e-114

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0001582, E-value = 7e-14 (G. max)
CNT0021956, E-value = 1e-12 (A. trichopoda)

Expression of CNT0009014

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MVLSVVLEERYGEHTGTTWNGIPNAFKCCRMSCYTGTYI*

>peptide 2 (46 aa)
FLAYFQSKFSVSLLLSKDQHIEHFASLSPAVLRVPVTDRRSHLPKK*

>peptide 3 (91 aa)
MGCQLCWGSQLQVFSPFCGVHIFDIYAGHSGTAAQFYKILSASRESVIITRQYCSHFSSLRFESSLFTQSSLLCNYACISALKQHHFGGGL*

>peptide 4 (33 aa)
MPSSFLSGLLVSLMVASLPSYLSQLLSSFISFL*

>peptide 5 (309 aa)
MDLNPFRLCSGLKVIGYFMILIVLAIVVLSYYAVVVLIWAPRLLDGGFTSFLSFTIIIIFHILLVMLMWSYIKVVIQDPGSVPENWKLVSEQNIEGGNSV
ALSDYASIENPTPTLSTEQIERRQSQSRGYCSKCQNGKPPRCHHCSVCQRCVLKMDHHCIWVVNCVGARNYKFFLLFVVYTFLISTLDTLVLLPSFIKFF
RQAENQSLLPGNIAVIFLVFVLNLAFSLSLLCFVIMHASLLSSNTTSVEVYEKKKSAQWKYDMGWKRNFEQVFGANKVLWFFPLFSKKDMENIPALHGME
FPTRSNAVE*

>peptide 6 (71 aa)
MHLCSQATPLRWRFMRRKNPRSGSMTWAGKGILNRFLAQIRCYGSFRCSRRKIWRTYRHYMEWNSQRVQML*

Sequence

>CNT0009014
GTTTCTCGCATACTTTCAGTCAAAATTTTCTGTTTCACTGTTGTTAAGCAAAGACCAACATATTGAACATTTTGCAAGTCTCTCGCCGGCAGTACTCCGT
GTTCCGGTGACCGACCGGCGTTCTCATCTGCCAAAAAAATAATAATTCCGACGGGTTATCGAGCTGGCTTCCCATATCTGGAGACGCTTCTTCCCAGCTC
GATCCCGACGGACGCCCAGTCTACTTCTGCCTAGAATTACTCCCACTCCTGCAATGGATCTCAATCCATTCAGGCTGTGTTCTGGACTCAAAGTTATTGG
CTATTTCATGATACTCATCGTTCTTGCTATTGTTGTACTTTCGTATTATGCCGTCGTCGTTCTTATCTGGGCTCCTCGTCTCCTTGATGGTGGCTTCACT
TCCTTCTTATCTTTCACAATTATTATCATCTTTCATATCCTTCTTGTAATGCTAATGTGGAGCTATATTAAGGTAGTAATTCAGGATCCTGGTTCTGTCC
CTGAAAACTGGAAACTAGTATCGGAGCAGAACATAGAGGGGGGCAACTCAGTTGCTTTATCTGATTATGCATCAATCGAGAATCCTACTCCAACATTATC
AACTGAACAGATAGAAAGAAGACAGTCTCAGTCTAGAGGCTATTGCAGTAAATGCCAAAACGGCAAGCCACCACGTTGTCATCACTGTTCTGTTTGTCAA
AGATGTGTTCTTAAGATGGATCACCACTGCATATGGGTTGTCAATTGTGTTGGGGCTCGCAACTACAAGTTTTTTCTCCTTTTTGTGGTGTACACATTTT
TGATATCTACGCTGGACACTCTGGTACTGCTGCCCAGTTTTATAAAATTCTTTCGGCAAGCCGAGAATCAGTCATTATTACCAGGCAATATTGCAGTCAT
TTTTCTAGTCTTCGTTTTGAATCTAGCCTTTTCACTCAGTCTTCTCTGCTTTGTAATTATGCATGCATCTCTGCTCTCAAGCAACACCACTTCGGTGGAG
GTTTATGAGAAGAAAAAATCCGCGCAGTGGAAGTATGACATGGGCTGGAAAAGGAATTTTGAACAGGTTTTTGGCGCAAATAAGGTGTTATGGTTCTTTC
CGTTGTTCTCGAAGAAAGATATGGAGAACATACCGGCACTACATGGAATGGAATTCCCAACGCGTTCAAATGCTGTAGAATGAGTTGTTATACAGGGACG
TATATATAACTTTGTATCATTACCTCAGACAATGCTGTTCAGATGCTAGAGTAGGCAGTTTCTTATTTACCATCAATTGATTGATTGATATTTTCAAATT
TACATTAGAAGCATGTTGGTTGTACTTATTTATCTCATGTGTAAATGTTCTGTAACATAATTCTGAAATTATGTCTTTGTATGAAACTCAATTTGTTGTT
GGTAACATCTGAAATGGTGTAACGACTGCCCAACTGTCTTTGACATGGATCTGGTGAAATTGAATTCTTCGGGAACTCCTGTATGATGTCGAATCAGGAA
CGTATGAA