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Detailed information on CNT0000909

BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003348, E-value = 2e-10 (V. vinifera)
CNT0043317, E-value = 1e-11 (A. thaliana)
CNT0024020, E-value = 2e-07 (A. trichopoda)
CNT0029963, E-value = 4e-14 (O. sativa)
CNT0011703, E-value = 4e-14 (S. tuberosum)

Expression of CNT0000909

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLQVSVRAWLCWQCWFVAAVLCLHFAGFKNLIVGWCMTFGL*

>peptide 2 (48 aa)
MKKKMKKKMKKKMRRPCPLHLKSNSRPPCLPSQYIPFRMEAGLCYFHF*

>peptide 3 (30 aa)
MKPIYFGVMRIWKSTSRTKEKKVRSERQEF*

>peptide 4 (51 aa)
MLAMLVCCRSVVFAFCRVQEFDSGMVYDIWTVNEILEFVCYKFLSFSVLLT*

Sequence

>CNT0000909
CACGAATTGAAGCTAGGGCTGACGTGATAAAGACGGGATGAAGCCTATTTATTTTGGTGTTATGCGGATCTGGAAATCAACTAGCCGAACGAAGGAAAAG
AAAGTTAGATCTGAAAGACAAGAGTTTTAGGTTTGTGGGAGAAGAAGAAGAAGATGAAGAAGAAGATGAAGAAGAAGATGAAGAAGAAGATGAGGCGCCC
TTGTCCTCTTCACTTGAAATCAAATTCAAGACCGCCTTGCCTTCCTTCTCAGTACATTCCATTTCGAATGGAAGCAGGGCTTTGCTATTTTCATTTTTAA
AATAGGCATTGGGGTCCCTTCTTGTTCCTCCTTTTCCTTTCCTATCCCAATGCCTATTTTAAAATGAAAACAACGATACACTGTTTTCGTTTGAAACTAT
TGTTAAGGAAGATAACGCTGACGAGTTCTTCAATTTGATTTTAGCTGACGGGGACCTTTTTTTATTCATCCACAGTCTCTGACTCTATTACGGCTAAACA
AGTAAAGAAAAACACGGAGAACAAAGGATAGGCATCCTGTATTTTGGCTTCTCCTCCACGCCCTCTCTCTCACTGGAACCTGACATCTATCACCTGCTTG
TTGCCACCTTCGTTCTGCTCAACACTATTCTTCTTGGCATGTTGCAAGTGTCGGTGAGAGCTTGGCTATGCTGGCAATGTTGGTTTGTTGCCGCAGTGTT
GTGTTTGCATTTTGCAGGGTTCAAGAATTTGATAGTGGGATGGTGTATGACATTTGGACTGTAAATGAAATATTAGAATTCGTCTGTTACAAATTTCTCT
CTTTTAGTGTCTTGCTAACCTGATGATAAAAATTGACATTTATTTTATTGTAATTGATCACTCAGCTACGAATGCAG