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Detailed information on CNT0009204


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9C9V6|Y1790_ARATH, E-value = 0.0

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003759, E-value = 3e-08 (V. vinifera)
CNT0002141, E-value = 7e-06 (G. max)
CNT0031985, E-value = 1e-07 (O. sativa)
CNT0035597, E-value = 2e-06 (C. reinhardtii)

Expression of CNT0009204

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MCKVLLWNYHHSKCLQHCRGSLCCRVSADDRGCRERKLDLQTRSVFQFLHTFRLERLNCDITKYKVLPFMV*

>peptide 2 (49 aa)
MDIFKKLLVTQICPYQNSYPLLKQSQDSPGLTMMIFTKPSTSISRGIQG*

>peptide 3 (39 aa)
ISASQIQTNPQPLVSCPSSSLYYYYYYYYYFLLSNYLRS*

>peptide 4 (77 aa)
MMIWMNIMQMKLENLQELKLYVFFQIDRKKCSVSYGQTIDHQLQVKRIDNLYLIIIVALKEYLFFLLLVFWRTICSL*

>peptide 5 (628 aa)
MKFMKLGSRPDTFITTEAVRSVNSEVVSDLIVQVKGSRYLLHKFPLLSKCSRLQRLCSESPETSQHQIVQLPDFPGGIEAFELCAKFCYGITITLSAYNI
VAARCAAEYLQMTEDVEKGNLIYKLEVFFNSCILSGWKDSIVTLQSTKSYPLWSEDLVITSRCIEAIASKVLAHPSKVNLSRTYSRRGPRDDISCIESDS
RRHNKDSSKIWWAEDLAELSIDLYWRSMIAIKSGGKVPAPVIGDALRIYASRWLPNISKYANLEKQIVHDQSESDSIGKHRLLLESIISLLPAEKGAVSC
SFLLKLLKATNILKGSCSSKMELARRVGLQLEDASVNDLLIPCVSHTCDTIYDVDIVITILQQFMLQVQSPPTSPLRRRGDFERRRSRSAENIDLEFQES
RRSSSASHSSKLKVAKLVDGYLQEIASDTNLPLSKFISIAEAIPGFARLDHDDLYKAIDIYLKGHPGLNKNERKRLCRILDCKKLSMDVCMHAAQNELLP
LRVVVQVLFFEQARTAMSGGHVTELPSNIKALLANHDDTAKTSASFNKAKMTPVNDQWSNASGLKSPKSNISTLKMKLAEDDDLDEHNADEIGKSSRIKA
LCVLPNRPKKMFSKLWSNNRSSVASEKN*

Sequence

>CNT0009204
GCATTAGTGCAAGCCAGATACAAACAAATCCACAACCTTTAGTTTCATGTCCCTCCTCTTCTCTCTATTATTATTATTATTATTATTATTATTTTCTCCT
TAGCAACTATTTGAGGAGTTGAAATAAGGGTCAATCTTGTTGTGTTATTTACCAAACTTTGTTAGACAGGATATTCTAAACTAACTAGTGCTTCTTTTTT
GTTTTTAGACAATATCTATTGCTATTTGCTAGTACTAGTAGTGGTGTCTAAAAAAAGTGAACCTTTCAACTGTTATAGAATTTGCCTTTGTCTCTTATGG
TTCTGCATATTGCTTGATATATTTTGTGGTTTTTGTGAAACAAAAAAGAGGGGAAAAAAAAAGACTCAAGAATATGAAGTTTATGAAACTTGGATCTAGG
CCTGACACTTTCATTACTACTGAGGCTGTAAGGTCAGTTAATTCTGAAGTTGTTAGTGATCTTATAGTTCAAGTAAAGGGTAGTAGATATTTGCTTCACA
AGTTTCCTCTGCTGTCAAAGTGTTCAAGGCTACAGAGGCTATGTTCTGAAAGTCCAGAAACTTCCCAGCACCAAATTGTGCAGCTACCAGATTTTCCAGG
TGGAATTGAGGCATTTGAGCTATGTGCAAAGTTCTGTTATGGAATTACCATCACTCTAAGTGCTTACAACATTGTCGCGGCTCGTTGTGCTGCAGAGTAT
CTGCAGATGACAGAGGATGTAGAGAAAGGAAACTTGATTTACAAACTCGAAGTGTTTTTCAATTCTTGCATACTTTCAGGTTGGAAAGACTCAATTGTGA
CATTACAAAGTACAAAGTCTTACCCTTTATGGTCTGAGGATTTGGTAATTACAAGCAGATGTATTGAAGCTATTGCTTCGAAAGTTTTAGCTCATCCTTC
AAAGGTTAATTTGTCAAGAACCTACTCGAGAAGAGGCCCGAGGGATGATATTTCTTGCATTGAATCCGATAGCAGAAGACATAATAAAGATTCATCTAAA
ATTTGGTGGGCTGAAGATTTAGCTGAATTGAGCATAGACCTTTATTGGAGAAGTATGATAGCTATCAAATCTGGTGGGAAAGTACCTGCTCCTGTTATTG
GTGATGCATTGAGAATTTACGCCTCAAGATGGTTACCAAACATTTCAAAGTATGCAAATCTTGAGAAGCAGATAGTACATGATCAATCCGAATCGGATTC
AATTGGAAAACACAGGCTGCTTTTGGAGTCAATAATCAGCTTGTTACCAGCTGAAAAGGGGGCAGTTTCTTGTAGTTTCTTGTTGAAACTACTTAAAGCA
ACTAACATATTGAAAGGTTCTTGTTCATCTAAAATGGAATTGGCAAGAAGGGTTGGACTTCAATTAGAAGATGCTAGTGTTAATGATCTGTTAATACCTT
GTGTGTCACACACATGTGACACAATTTATGATGTGGATATAGTTATTACCATATTACAACAGTTCATGTTGCAGGTTCAAAGTCCTCCAACAAGTCCACT
AAGAAGGAGAGGAGATTTTGAGAGGAGAAGGTCTCGATCTGCGGAGAATATTGACCTTGAGTTTCAAGAAAGTAGAAGATCTTCTTCAGCATCACATAGC
TCAAAACTCAAGGTAGCTAAGCTTGTCGATGGATATCTTCAAGAAATTGCTAGTGACACAAATTTGCCCCTATCAAAATTCATATCCATTGCTGAAGCAA
TCCCAGGATTCGCCAGGCTTGACCATGATGATCTTTACAAAGCCATCGACATCTATCTCAAGGGGCATCCAGGGCTGAACAAGAACGAAAGAAAGCGCCT
TTGCAGGATATTAGACTGCAAGAAACTATCAATGGATGTTTGTATGCATGCTGCACAAAATGAATTACTTCCACTAAGGGTAGTTGTTCAAGTTCTTTTT
TTCGAGCAAGCTAGAACCGCGATGTCTGGTGGTCATGTAACAGAGTTGCCTAGTAACATAAAAGCACTTCTAGCAAACCATGATGACACAGCCAAGACTT
CAGCATCTTTTAACAAGGCCAAAATGACACCAGTTAATGACCAGTGGAGTAATGCATCAGGCCTAAAATCTCCAAAGTCGAACATTTCAACTCTGAAAAT
GAAGCTAGCTGAAGATGATGATTTGGATGAACATAATGCAGATGAAATTGGAAAATCTTCAAGAATTAAAGCTTTATGTGTTCTTCCAAATCGACCGAAA
AAAATGTTCAGTAAGTTATGGTCAAACAATAGATCATCAGTTGCAAGTGAAAAGAATTGATAATTTATATCTTATCATTATTGTGGCCTTAAAAGAGTAT
TTGTTTTTCCTTTTGTTAGTTTTCTGGAGAACAATTTGTAGCCTTTAGAATAGAGAAATCTTTATGCTTAAGTATTGGTGTAAAATGTAACCTAAGCTAA
TAAAAGTACAACAAAATTTACAATTAGAATATTGGGA