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Detailed information on CNT0009236


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0000616, E-value = 1e-06 (G. max)

Expression of CNT0009236

Peptides detected in this lncRNA

>peptide 1 (215 aa)
MGSLTTNNFLKFTSIATPCRKFGDPNCSPRSVPPILCYGFKANVRAFASQKSVKKSRRKGKTEKTDTAIPDKYLLSDDVNPDYVEDSKNASPLDTSEAGT
SVPMIPSRGSVLKACIITSGLIGLLGIVIREGSHVASAGGLPIVDCSVEIPLTFQMWHLELITGLVILVSCCRYLLLKIWPDFAESSEAANSQVLSSLEP
LDYIVVSLLPGISEN*

>peptide 2 (30 aa)
KIASKDFLIKNKRIGLHSISPLSSFSIRYQ*

>peptide 3 (117 aa)
MGISMTQELLFRGALLPLFGISWLSVVATASIFGILHLGSGRKYSFAVWATFVGIVYGYATILSSTVVVPMAAHAVNNLLGGIIWRYSQNRLHAGTNAKW
PAVIATSVVLKTGRFTS*

Sequence

>CNT0009236
AAAATAGCCAGTAAAGATTTTTTAATTAAAAATAAAAGAATTGGTCTCCATTCTATCTCTCCCCTCTCTTCCTTTTCCATTAGATACCAATAAAAAATGT
AAAGTTCAAGTGAGATTTATTATAGGTAGAAGGGAAAATCTTGTTATAATTCTACAATTCAGCTTTCAAGCAAATCATCAATGGGTTCACTTACTACAAA
CAACTTCTTGAAGTTCACTTCTATTGCCACTCCCTGTAGGAAGTTTGGTGATCCCAACTGTTCACCAAGGTCTGTACCCCCTATATTGTGCTATGGGTTT
AAAGCCAATGTAAGGGCATTTGCAAGTCAAAAATCGGTTAAGAAATCGAGAAGAAAAGGGAAAACAGAGAAAACGGATACTGCAATACCCGATAAGTATC
TGTTAAGTGATGATGTTAATCCAGATTATGTTGAAGATAGCAAGAATGCATCTCCTCTTGACACTTCCGAGGCTGGGACTTCTGTACCGATGATCCCATC
TAGAGGTTCTGTGCTTAAGGCATGCATAATCACTTCTGGTTTAATAGGTCTTCTAGGCATTGTAATTAGAGAGGGCTCTCATGTTGCATCAGCAGGAGGA
TTGCCAATTGTTGACTGTTCTGTCGAAATACCATTGACTTTCCAGATGTGGCATCTTGAGTTGATTACTGGATTGGTCATACTGGTATCCTGTTGTCGGT
ACTTATTGCTGAAGATATGGCCAGATTTTGCTGAGTCTAGTGAAGCAGCAAATAGCCAGGTGTTGAGTTCACTTGAACCTTTGGATTACATAGTGGTATC
ACTTCTTCCAGGCATTAGTGAGAACTGATTACAAGCTTGTATGGGTATCTCAATGACGCAGGAGCTTCTCTTCCGTGGTGCACTGCTACCACTTTTTGGC
ATCAGTTGGCTGAGTGTCGTGGCAACTGCTTCCATATTTGGGATCTTACACTTGGGCAGTGGTCGGAAATACTCCTTTGCTGTCTGGGCCACATTTGTTG
GAATTGTGTATGGTTATGCTACAATTTTATCATCAACTGTTGTTGTGCCAATGGCTGCTCATGCTGTAAATAATCTACTAGGAGGCATCATATGGCGCTA
CTCTCAAAATAGATTGCATGCAGGAACAAATGCCAAGTGGCCTGCTGTAATTGCAACTAGTGTTGTTCTGAAGACTGGTAGATTCACAAGTTAAAGAGTC
ATTTGGAATTCCTTTTTTTTCTACTTATTAGCATATCAAATTGTGAACTTGTGTTTTGGGAAGCTTCACCATATCAAATTGCTATTTTGCACAAGACACA
GGAGGGGGTGAATTGATTTGTGTCAAATTTTTGCCATTTCCTGAATTTTGTCCAACATACATTTCAATACATGTTTCTTGTGAAATCACCAAAAAAACAG
AATAAAGTACAGAACACAAGATTTTTACGTGAAATATCACACAGCTCAAAGATATAACTCTAGCTTGAAGCAAAATGTTTCTCAACCAAAC