Detailed information on CNT0000059 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P18616|NRPB1_ARATH, E-value = 6e-15

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000059

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)1.321.9672.6280.8250.360.4520.3530.6630.3690.2950.1610.17500.5170.836leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.62.8

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIIRHNENLKRQEKNGSPAHIISEFVQLLQCNIL*

>peptide 2 (32 aa)
MDLLHILYLSLCNYCSATYFDNEFKRFIAFEI*

>peptide 3 (40 aa)
MVKISGSWLKRVMVAVVLSSQRLLLRDENKCKVQTLEEEK*

Sequence

>CNT0000059
GAAACATTCAAGATGGAGCATGTGGTAAGGGTTTTTGTTCTATCTAATTCATGGTAAAGATATCGGGGAGCTGGTTAAAAAGAGTCATGGTAGCTGTAGT
GCTTAGCAGCCAAAGATTACTATTAAGGGATGAAAATAAATGCAAAGTACAAACCTTAGAGGAAGAAAAGTGATGCGATGACCAAGAACAGCTTCCTGAA
CCCATCAAAAGGAAACAAACTCTTTCTACAGAAAGGGATGATATAACTCATCAGTTGGCCATGATCATAAGGCACAATGAGAATCTGAAGAGACAAGAGA
AGAATGGATCTCCTGCACATATTATATCTGAGTTTGTGCAATTATTGCAGTGCAACATACTTTGATAATGAGTTCAAACGGTTTATTGCATTTGAGATTT
GACAAAATTTGAGTAGAAACAACTCTAAGTTCTTATGCTCATCATGGTTTACATGTCAGTTATTGTTTTCCATACTGTGTCACTTGAATTAGCAATGCCA
ACTCTTCCAACATAGGATTTTAGCTATTGAAGAAGCATGGGTGGAAAGAAGGGACTGGTCTTGGAGTCTCTGAGCAGTGGACAAAGTGGAAGCCTTGAAG
CACTACAAATTTAGCTTAGCATTTGAAATTCTAATGAGAAAGATTATGTAATTGAAAAATTATTTCAATCCCTTGTTGCTGGTATGCATATATATTTTAT
CTCTATTCTCTTGCTTGCATTTACTCTATATACAACATTATTAATGTAACACTAGATGTTCGTGGGCTCCAGGAACACTTGCATCCCA