Detailed information on CNT0000065 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000065

Sequence

>CNT0000065
CAAATTTAATCTTTCACTCACACACCCCCCAATAATAGCCCACAAAAATAACATAACAAGCTAATACCTGCTCAGAAAAATCAATCTTCTTTCCGTGTGA
TCCTTTGTCCACACCAATCTGAGGAAAAGTCAAAAAGCTCAAACACATCAAATGTTAATTTAAAGAAACTATTTTCATCGATAAACATGCAATTACCTCT
CCAACTGCAGCAGAGGGTGTGGAATCAAAATATTCCTTCAACGTTTGAAACCAATTGGGACTCCGTTCCTTAACAAACCTGCAACAACGTCACAAAATAA
GGTCATTTCAATTGAGGAAACCAAGAAACAAAAACAATTACCAAGGATGGAGACCGAAGCAAGGAATGACGGAAGGGTATGTTTCGGCCAACTGCTTAAC
GGAGTGCCAGTCTTGTTCGGAAACTCC

lncRNA-RNA interactions

Number of interactions: 5

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA16G26671.1 Uncharacterized protein protein coding CNT0000065 312 124 UTR5 Trans
GLYMA16G26700.2 Uncharacterized protein protein coding CNT0000065 1190 427 CDS Cis
GLYMA16G26700.5 Uncharacterized protein protein coding CNT0000065 1190 427 CDS Cis
GLYMA16G26700.6 Uncharacterized protein protein coding CNT0000065 1190 427 CDS Cis
GLYMA16G26700.7 Uncharacterized protein protein coding CNT0000065 1190 427 CDS Cis