Detailed information on CNT0000084 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000084

Sequence

>CNT0000084
ATTAATGTCTAGATCCAACATCCTTAATTACTACTAACAAAAATAGAATAATGTAGAGTTTCTAATGAGGCAATGCATGAGACCTAGTGAGTTTTAGCAA
AGTAAATGTCCAAAGGCATCAAACCAATTCATGCACCCCCATGTTTTTACATTATAAAATTCTCTGTTACTTAGTATGAAACAAATATTAAGTGAATGGT
AAACAAGGAAAACATGATAGAAAGTTGATTCCAAGGAAATGAACACTCTATCATACGGCTCCAAGTGTTGATGGCGCAAACATGGCTTTGAAATTTAAGT
TGCTTGAAATCACCCCCA

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA09G32810.1 Uncharacterized protein protein coding CNT0000084 153 128 CDS Trans
GLYMA16G21930.1 Uncharacterized protein protein coding CNT0000084 852 318 CDS Cis
GLYMA16G21930.2 Uncharacterized protein protein coding CNT0000084 852 318 CDS Cis
GLYMA16G21930.3 Uncharacterized protein protein coding CNT0000084 852 318 CDS Cis