Detailed information on CNT0000087 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000087

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00000000.3850.4291.0300000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.10.20.30.40.50.60.70.80.911.1

Peptides detected in this lncRNA

>peptide 1 (112 aa)
IHDIQEHTRTSTVVCVCVCHEDIWKICPRNEDIWKTKILRKKDESQENDFKDDVSVCLPLINTAIRDVEKGTFPKSCLLNVEFPTSLLSNKGFKLTKQSM
WRSTPNWLAVSTS

>peptide 2 (59 aa)
FMTYKNIQGHQQLFVCVSVMRTFGKYAQEMRTFGKQRYLGRRMKVRKTISRMMYQSVYH*

Sequence

>CNT0000087
ATTCATGACATACAAGAACATACAAGGACATCAACAGTTGTTTGTGTGTGTGTCTGTCATGAGGACATTTGGAAAATATGCCCAAGAAATGAGGACATTT
GGAAAACAAAGATACTTAGGAAGAAGGATGAAAGTCAGGAAAACGATTTCAAGGATGATGTATCAGTCTGTTTACCATTAATAAACACAGCTATTAGGGA
TGTTGAAAAGGGAACTTTTCCCAAAAGCTGCCTTTTAAATGTAGAATTTCCGACATCTCTTTTGAGTAACAAGGGCTTCAAATTAACCAAGCAAAGTATG
TGGAGATCCACTCCAAACTGGCTAGCTGTTTCCACCAGC