Detailed information on CNT0000128 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0000128

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)2.7763.0072.84500.5960.8311.1060.7321.4271.9571.1231.4211.1150.3810.693leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.62.833.2

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MILYRILPTTLHDDFLCVPDVVSPLTRQPFCPISSTVSSKANVAFAANDTHNEKLQKTLVVSNFPSITTSKTTTVVDKRTKLQRAVSIPDPTTP*

>peptide 2 (36 aa)
MFIKLSFQVWVDAATKNSTVSAKSPGLIVSVYVDPI*

Sequence

>CNT0000128
ATGAACCAATGCAAAATTCCTTACGAATTTGCTTCCCTTAATTTGGGCTAAAATGGTAAGGGGGATGTTTGGAATGTGGTCGGTTCTATAGGTCCAGATC
CTGCTAAACAAAAATTCAAGTATTGGTAAAGCCAAATTTTCTGTCTTGGTTTTTTTCTCTTTCTTTTTCTTTCATTCATTTTATGGAAGCAGGAAATTTT
ATTACTCTCAGATTCCATTAGCAATTAGCATAGCATTTTTCATTCTGTTAATTTTCTTCTCAAAGTGAATGACATAAGTGGCCTCCATCAATGTAGTTAT
GTGCCAACTTGCCATCTAAACTCAACCATAATAGACTTTTGGATACCTGTTTATCTTTTCTTTTGTTTTAGAAGATGATTCTCTACCGGATTCTCCCAAC
TACTCTTCATGATGACTTTTTGTGTGTTCCTGACGTGGTATCTCCTTTGACTCGACAACCTTTTTGTCCCATCTCTTCAACAGTATCGTCGAAAGCGAAT
GTTGCATTTGCTGCAAATGATACACATAATGAGAAGTTGCAGAAAACATTAGTAGTTAGCAATTTTCCATCCATCACTACTTCAAAGACAACCACAGTGG
TGGATAAGAGAACAAAACTCCAAAGGGCAGTATCCATTCCTGACCCCACTACACCATAGTTCTTTCCACACCATAGTTCGTGTCCACTTCTCTATGTAAT
AATCGGGAAGCCAATTACATTTGACTTGTGATCATCATTACAGGTAACTACTATAACAATGTAACTATGTAATCTGGAAAACCAAACAAACAAATCATGC
TAACACAAAGCCGAGCCTTCTTTCCTTAAAGGAATATTCAATCTCTTGAGCCAAGACTCCATAAGATCTGATGCAGGAGCTGGAGTCATGGACATATTCA
TATAGGAATTGACACTTTCAAAGGCGTAGTGGGGTCAGGAATGGAAAGAGCGTCTTAATGCAAAATTTTGCAATCTAATGTGATTTTATTTTTTTCACAA
ATAGAAGTTTCATCTCAAAACTGTTTTACCTTTACCTGGCCTATATTTCCCAGCTGTACTCTTCTTGCTGGTTTGACACTTTAAGTTTAAATATAGAAAA
AAAATTATGTTATGAGTAATAATTACGTGTGACTCTGCAGTACCTACATACAACCAAATCTGAGTTTGTTTAGGTTTCTCACCAGTAGATTGTGGGAGAT
CTCATGCACCTTAATCCTACCGAAAAGAAAGTCAACTTGTTTTAGTTAGCAAAAGTAAAATTCTTTATTTGCTATGTAGCTACTGACAACTGTCTACAGC
TTATAGTGCCAAGTCAACAACTAGCAAAAAAAAAAAGTTTATTTTTTGATACACGATTTAGTTGTGGAACATTGCTCTATTTGGACTAGTTCCCTTTCCC
TAATGTTCATTAAGTTAAGTTTCCAGGTTTGGGTAGATGCTGCAACAAAAAATAGCACTGTATCTGCTAAGTCTCCAGGCCTAATAGTATCTGTGTATGT
AGATCCTATTTAAATCAGAAATGTAGATGCTGGCCCGTAATATTAGTATTTAGTGACTAGTAGCCCCTTCTGTTTACAAGATTTTTCTGTTTAATTTTTT
GTCCTTTTTTCTTCTCAAAGAAGAAAAGGTTTTAAGAAATGGCCCCTTTTAGTCAACACAAGCTGTGAAAGAGAAGAAAGGGAAAAATAAAGAATAGAAG
ATAAAAAATAATGGGAAAAAAGATAGAAGAGAAGTGCATGCGTCTAGTGACATCTTCTTAGGGTAGATTCACCAAACCAATAGGGCATTTCAATTCAATT
CATTTTCTTTTTGCTTGTGAAAACATCCATTTATTATGTGTCTTGGTCAACTTTAATTTAACTTAAAAGACAGAGAACTTGTCAGTAGTTGAGGAAATGG
AATGGCTCCAAACTTTGCTTTACAGTTTCGAATTAATTTTTTTCCTTTGTTTTCAAAAGGCAGTAAATAAATAAATGCCAATTTTTATAAAAAGGACTTT
TTATTTCTCCTTTTCCAAAATCAACACCTATTTTTTTATGCATTCAAATTAATAAGTATCTGTATTCAGAGTCATTTATTTTTTTTGATTCAGAGTCATT
TATTAAATCACCTTTATTAAATTTCCAAGACGGACGTGAAC