Detailed information on CNT0000134 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8VZH2|APM1_ARATH, E-value = 4e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000134

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYSSKFIFLISNCCISENGKSIQWTNSSLL*

>peptide 2 (31 aa)
MDLKCKARALSARLDQTISSQEMIALTKVTF*

>peptide 3 (33 aa)
ISVTFYLDGHVFVLLLSRLHFQIMIIEKARARS*

>peptide 4 (57 aa)
MEQKQQSIDQFKGNTRLPSFAIPERYELHLIPDLSARTFSGTMQISLTINESTSFLV*

Sequence

>CNT0000134
TATCTCTGTCACTTTCTACTTAGATGGTCATGTTTTTGTTTTACTTTTAAGTAGACTTCACTTTCAAATTATGATAATTGAGAAAGCAAGAGCAAGATCA
TAGGAGGAAAATGGAGCAGAAGCAGCAGAGCATAGACCAATTCAAAGGCAATACAAGGTTACCCAGTTTTGCTATTCCAGAAAGATATGAACTTCATTTA
ATACCTGATCTCTCTGCACGTACTTTTTCTGGCACCATGCAAATTAGTCTTACGATCAATGAAAGCACCAGCTTTCTTGTCTGAAACTCCGAGGAACTAG
TCATCCAAAACACTCACTTCACTAACTCTCAAGGACAGGATAATTGGGAAAGAATATTGGTCAAATATGGTGCTGGACTTTTACTTACCAATTTCATAAG
CCAAATAGTCCCACTGGTTAATAGTGATGAGAAAGCAGATGAGATAGAAGCATTTTTTGCCAGTCACATGAACCATTCCATCGTTATGCATTTGAAGTTA
AGCATTGAACGTATCCGTATCAAAGCAAGATGGATTTGAAGTGTAAGGCAAGAGCACTCTCTGCAAGACTTGATCAAACAATTAGCTCACAGGAAATGAT
AGCTTTGACAAAAGTTACCTTTTAAGCAAATCTATTAACATAGACCGTTTCCACTAGGCTGTCTATACCTCTGCCTCTTGTGCATTCCTAATATCTTGCT
ATATTTGAGTAAATACCAGTTTGAGAATAGTTGGGTCAGTCCAAAATAGTTAACCAAGCTGTCATGTATTCCTCAAAGTTTATCTTCCTTATTAGTAATT
GTTGTATTAGTGAAAATGGCAAGTCTATTCAGTGGACAAATTCTAGTTTATTGTAGTAATTTGCAGCAAATGCCTAGTTTA