Detailed information on CNT0000175 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|A7MS85|UNG_VIBCB, E-value = 6e-22

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
: nothing found

Expression of CNT0000175

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MQQSIMFLLLHILLVCLQIEASLAAGPFLKPTAVSLGRF*

>peptide 2 (105 aa)
EKKNGTKKGTTEHIHPCVSVPAIAKGEEKSSRTLTDFFKPTLRRSQFLHALPRTKVARGIQQAPRQVQAQSQTLHREGLQKQRIRLCWCEAGRAAGGGNV
VGCSP*

>peptide 3 (36 aa)
MLSLMNSKNPMPSLSPNSWEARFLAAATTSFSLPRT*

>peptide 4 (34 aa)
GKRRMEQKRGQQNTFIPVFPFPPLQRGKKSHREP*

>peptide 5 (79 aa)
MCRDLSFYKDCSKGNVDHQVIITFGTSSFHTQFDSGSIKHILMSKKAGNNLLMLLSRQYHRRKELCFCCGETLLQKNLG*

>peptide 6 (89 aa)
GKEEWNKKGDNRTHSSLCFRSRHCKGGRKVIENPNRLFQTHSPTKPIPPRSPSNKSRAWNTTSSSPSPSAISNSASRGSPKAKNQTLLV*

>peptide 7 (45 aa)
MILSISNLPRKDVFSFVDNLVLRCCYLGDYAVLTRILAFNYVLGY*

Sequence

>CNT0000175
GGGAAAAGAAGAATGGAACAAAAAAGGGGACAACAGAACACATTCATCCCTGTGTTTCCGTTCCCGCCATTGCAAAGGGGGAAGAAAAGTCATCGAGAAC
CCTAACAGACTTTTTCAAACCCACTCTCCGACGAAGCCAATTCCTCCACGCTCTCCCTCGAACAAAAGTCGCGCGTGGAATACAACAAGCTCCTCGCCAA
GTCCAAGCGCAATCTCAAACTCTGCATCGAGAGGGTCTCCAAAAGCAAAGAATCAGACTCTGCTGGTGTGAAGCTGGAAGAGCTGCTGGTGGAGGAAACG
TGGTTGGATGCTCTCCCTGATGAACTCCAAAAACCCTATGCCCTCACTCTCTCCAAATTCGTGGGAAGCGAGATTTCTTGCGGCGGCGACGACGTCGTTT
TCCCTCCCACGCACTTGATTTTCAACGCTCTCAACTCTACGCCTTTTCATACGGTGAAAGCCGTTATCCTTGGCCAGGTACAATATCCGACATGTGCCTG
ACTTATGTGTAGGGATTTGTCTTTTTACAAAGATTGCAGCAAGGGGAATGTGGATCATCAAGTAATAATCACATTTGGGACTAGCAGTTTTCATACTCAA
TTTGATTCAGGAAGCATCAAGCATATTCTCATGTCAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATATCACAGAAGGAAGGAGTTGT
GTTTCTGTTGTGGGGAAACTCTGCTCCAGAAAAATCTAGGTTAATTGATGCAACAAAGCATCATGTTCTTACTGCTGCACATCCTTCTGGTTTGTCTGCA
AATAGAGGCTTCTTTGGCTGCAGGACCATTTTTGAAGCCTACTGCTGTAAGTTTGGGGCGCTTCTGAAATCAATTTGCTTAATGTATAGATGATTCTGTC
GATTTCAAATCTGCCTAGAAAAGATGTTTTTTCTTTTGTCGATAATTTGGTCCTACGGTGTTGCTACCTTGGAGATTATGCTGTACTGACTAGGATTTTG
GCTTTTAACTATGTTCTCGGATACTAAATTGATTTCGTGTATTATCTATGTGCTATCCTAATATTAACGAACAACACCCTG