Detailed information on CNT0000177 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q5R9L4|HINT3_PONAB, E-value = 5e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000177

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SNPNTQYLSEFFFHYGNATRGDSKESQSH*

>peptide 2 (41 aa)
QIQTHSTCLNFFSTMGTPHVATAKKARAIRIQKLHPMRCDW*

>peptide 3 (42 aa)
MAGATPSCVFCAIAAKSTSSNTLLYSDDKVVAFQDINPSAFR*

>peptide 4 (117 aa)
MINLNLETFRHYLVVPVAHIPTVKYLQRKTDDYSLVSHMLEVGKTLLNRDAPQSQQYRFGFHQPPLNSVNHLHLHCLALPYTPRWRSIKYLSLGPLGFIE
AEKFLEKIKPLSVQSKV*

Sequence

>CNT0000177
GTCAAATCCAAACACACAGTACCTGTCTGAATTTTTTTTCCACTATGGGAACGCCACACGTGGCGACAGCAAAGAAAGCCAGAGCCATTAGAATTCAGAA
GTTGCACCCAATGCGATGCGATTGGTAGTGTTAGGGCAAAATAATGGCGGGAGCTACTCCGTCCTGTGTTTTCTGTGCGATTGCCGCCAAATCCACCTCT
AGCAATACTCTTCTTTACTCCGACGATAAGGTTGTTGCTTTTCAGGACATTAATCCATCCGCTTTCAGATGATCAATCTGAACCTGGAAACTTTTAGGCA
TTACTTGGTTGTTCCTGTGGCGCACATTCCTACTGTTAAATATCTTCAGAGGAAAACTGACGACTATTCTTTGGTGAGTCACATGTTAGAGGTGGGGAAG
ACGTTATTAAATAGAGATGCACCTCAGTCCCAGCAGTACAGATTTGGCTTTCATCAGCCTCCGCTGAACTCTGTTAACCACCTACACCTCCATTGTTTGG
CGCTACCATATACACCCAGATGGCGATCTATAAAATACTTGTCTCTTGGACCACTTGGCTTCATTGAAGCAGAGAAGTTTCTGGAAAAGATAAAGCCATT
GTCAGTTCAGTCAAAAGTATGACGGTCTGTTTGATTTCCGGTTACCCCAACGTGATATTGCTTTCCGATTGAAGATCAACTGTCCAGATTAATTAACTTG
CAAAGTAGACACCACCAACAGATGTTCTCCTGCAGCAACATTTTTGTCTGCTCACGAAACATGGTTTGCAGTTAAAACAATCAGAGCCTAGTTAACTTGG
AAGTTACTGGTTATAGTTATATTTGGTTTTTCATCCTTCCAGGATGCTAGAAAGATTGGATCTCATTCAAACTTACCTCTGTTCGGTTTGATGACAAGCA
AAGTTTGTAGTTACAGTTATCGATTTGGATCTGTTGATCATAATGCCTGATATGATATCTTGACTTTCATAAGAAAAACAATAATACTGGTAACTGCTAT
ACATTGTAACACAAGCCCTACTGACAGATATTTAGCATAACTGCTTGTGTTGGAACTCCAGATACTGTGGTGGTGAGTTTGATAAATTACCATATTATGA
TAACACTAGCATAGGCAAATTATCTTTTTCTCTTTTTTA