Detailed information on CNT0000196 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000196

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MAIKKVLILVIYIFIVQSSSSSDLNKITLQFRLY*

>peptide 2 (36 aa)
MAGSGSIATNKEVARFERSCFCWHSRRLGKRSPYGT*

>peptide 3 (112 aa)
HVSDQRRRQHPYEDVCLARARLSNALLPRNSSVHLRDMSTVPPSQLCSLLSLFLFDTYLKYLPCSSSYYIKRFILSTSFQISVQKHSNFAISYPVSFLTR
KKRKEGSFNVRE*

>peptide 4 (35 aa)
MLTYRSYISNKHGRKRVHSNKQRGCKIRTKLLLLA*

>peptide 5 (49 aa)
TCLIKDAANIPTRMSAWHVPDCQTPYYLGIVVCIFVTCPLSLHPNFALS*

Sequence

>CNT0000196
CACGTGTCTGATCAAAGACGCCGCCAACATCCCTACGAGGATGTCTGCTTGGCACGTGCCAGACTGTCAAACGCCTTATTACCTCGGAATAGTAGTGTGC
ATCTTCGTGACATGTCCACTGTCCCTCCATCCCAACTTTGCTCTCTCTTGAGTCTTTTTCTCTTTGACACTTATCTTAAATATCTTCCTTGTAGTAGTTC
TTACTATATCAAGAGGTTCATATTGTCAACTTCATTTCAAATTTCAGTGCAAAAGCACAGTAATTTTGCCATTTCTTACCCTGTCTCATTTCTGACCAGA
AAGAAAAGAAAAGAAGGAAGCTTCAACGTCAGAGAGTGACACAATATAATAAAGGGTTATTTTTGTCATTCCTCTCTTCTTTGCTATTCTACTGCTCTAA
TACAATGGCCATCAAGAAAGTTCTAATCCTGGTCATCTACATTTTCATTGTTCAATCCTCTAGTTCAAGTGACCTCAACAAAATCACTCTTCAATTTCGC
TTGTATTAATTGTGGTAAAAATCATTGCTTAATACATGCTTACTTACAGGTCGTATATATCAAACAAACATGGCAGGAAGCGGGTCCATAGCAACAAACA
AAGAGGTTGCAAGATTCGAACGAAGCTGCTTCTGTTGGCATAGTAGAAGACTCGGCAAGAGAAGTCCCTACGGGACCTGACCCCCTTCATCACATCAACC
ACCCTATAGGCCATTGAATTTCCTTCCTTAAAAAACTCTGCTATATATACTTTAGTAGATTTTAGTGTAGTAGGTTCGTGCTTTAACAAAGGACCCTCCT
CATTAATTCCACTATTTTGTTTATTTTTCTACATCATGTATTTAGTGCTTACGGTTTTGTAATTCACGGTCCATATCTTCTGCTATGTGCTTACTTTTGT
ACATAATCAGAACCGATTATACTTGGGA