Detailed information on CNT0000251 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000251

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)6.1755.97512.9560.7949.3534.7868.85410.2182.4912.8453.252.8743.0664.4843.424leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)01234567891011121314

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MFFFIHMWTHFDEVKEIFPLGFYSLLVVPPMLAMMNLFWFWKIAKGLVKTISKAKHSK*

Sequence

>CNT0000251
AACAGATTAAAAATTTAAAGTAGGATATGATAGCATATCTTATCATATCTTGTTTATCCTGACCATCAAGGAAGCCCATGGTGTTAATACAAAACCATTT
TGATGTCTCTACCTGGCATCTTAAGCTTTTAGGATAGTTGATTCTTTACATGATATCAAAGTCTCTATAACCGAGTGATTGAGTGCCCTACTCATTCTTC
CAAATAAAAGTTGAATTCAAGCACAAGGTAGTTGATTGCAAGGATTTTCCTATTCATGTTCTTTTTTATCCACATGTGGACCCATTTTGACGAGGTTAAG
GAGATCTTCCCATTGGGTTTTTACAGCTTGCTTGTGGTGCCTCCAATGTTGGCAATGATGAATTTGTTTTGGTTCTGGAAAATTGCCAAGGGTTTGGTTA
AAACTATATCAAAAGCAAAACATAGCAAATGAGCCTACCAAATGGCCATTTAATTAATTTTGCACAGTTGTGATTAACATTTTTTCCCCCATTTATCATA
CTTACAAGATTCAGTACAGTTCTGGGCTGTATATTTGGCATTAAGCAATTGAATATATTTTTCAGTGATTACATGTATTCTGAATCATTACAGAACAACA
AGAGCTAAAACCACAAAGTTATAGAATCAGCCATCACATAGTTCAAAGATTCTGTAGCATCTTTCTTATCTTCTAATTAACCATTATGACTACTATTTGA
TTGAATATAACTCAAAGCTTCAGTTTCATTCCTATACTGTTTATTATATACAAACATCACATGAAGATATGGTAAGGCCATTACATCAGCCTAATACTGG
GTGCCTTAATAAGTTTAT