Detailed information on CNT0000252 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000252

Sequence

>CNT0000252
CTGTGAACCACACCAGGTGTTCCTCCCCTCTACTCCCTTTATTTGAACAAAATAGATTGTAGAGGATCCAAAAGCATACCACATTACTGTCCAATCTTTT
CTATTATGCTTGCTACCCACCATCTACTTCAAGCAATGCCTAAGTGGTAAGAAAAACATAGTATACAACTAGTTATTCAAGACACAGCTGGTCAAGTCCT
GCTTTCAAAATGTCTACATGAATTTCCAAATTGTATTTCTCTGTCCGGTTTTAATATATATAGGAAAAAATTCAAGACATCACATAATCAACTATTGAGT
ATTGAAACATAAACCATCAACCTGACAATATAGAAGCCTTCATTTCCTACAGAAACTAGGTTCAATCTTCCATAATGTCTATTGTTACATATTAGTTACA
AAGAAAACTTTATGCAACAGACAAGTTCTCTACATACCTGATAACGGAGATTTGCTGATATTCCAAGAAAGCATGCATATATAACTGCAGTTTTGAGTAT
TGG

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA11G35750.1 Uncharacterized protein protein coding CNT0000252 836 316 CDS Cis
GLYMA18G02660.1 Uncharacterized protein protein coding CNT0000252 626 318 CDS Trans