Detailed information on CNT0000270 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000270

Nothing found.

Sequence

>CNT0000270
CTACTTAAAGAGGTCACCAGTGATTTAGATACAACCTAATAAAAATTAATATTAATTTAATATGAATTTGTAAGTGAATTCATATGGGAACAATCTTAGT
TCCCTAATATCTTATAGAGGATCCATGACAGTTCAGTGCAGGTTTGTCGTGATTTCACCTTTATTCAAGAAACTATCTACAAAACAGCACTTACTATGAA
TAAGCAAAGTTGAATAATGTCTTCTTCAAGAAGCCCCCAGAAGAAATCTTATTACACTCTATCAAGCACACGGGGAACAGCACAGAAAATAGTTGGTTTT
AG

lncRNA-RNA interactions

Number of interactions: 8

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA01G43470.1 Uncharacterized protein protein coding CNT0000270 410 227 CDS Trans
GLYMA01G43470.2 Uncharacterized protein protein coding CNT0000270 410 227 CDS Trans
GLYMA01G43470.5 Uncharacterized protein protein coding CNT0000270 410 227 CDS Trans
GLYMA01G43470.6 Uncharacterized protein protein coding CNT0000270 410 227 CDS Trans
GLYMA02G34544.1 Uncharacterized protein protein coding CNT0000270 499 208 CDS Trans
GLYMA04G32720.1 Uncharacterized protein protein coding CNT0000270 611 250 CDS Trans
GLYMA11G02030.1 Uncharacterized protein protein coding CNT0000270 662 252 CDS Cis
GLYMA11G02030.2 Uncharacterized protein protein coding CNT0000270 662 252 CDS Cis