Detailed information on CNT0000276 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O22160|TL15A_ARATH, E-value = 3e-47

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000276

Peptides detected in this lncRNA

>peptide 1 (30 aa)
DSNKSTDSHRQVEGRENEIKMRIICSTEKQ*

>peptide 2 (30 aa)
MLRVIHCSAISIPLLNTHSKTFKCLHRMVS*

>peptide 3 (31 aa)
MVPMTLCRGELHLRVTARYGSCSQRLIVFHL*

>peptide 4 (31 aa)
MPLRGVRDKISSTSLIEHMDIHNSNNKQLRR*

>peptide 5 (116 aa)
MALVLNVSLCSTCKPHLSLSTSNPNKASSTFPLPLPLLGLNIKKSLQPSQKLTFSLGESVSGATLVALLSASFIFVDPALAFKGGGPYGQEVTRGQDLTG
KDFSGKTLIKQDFKTV*

>peptide 6 (29 aa)
MLTWKVHLQQEIHLLRDQILQALTSRMYH*

Sequence

>CNT0000276
GACTCTAATAAGTCCACCGATTCTCATAGACAAGTAGAAGGGAGAGAAAATGAAATCAAAATGAGAATTATTTGTTCCACAGAAAAGCAGTGAAGGAACT
CAGGTAACTCTCATGCTGGGTTGAAATCCATTCACTGTTAATCCTCCATCAACACAAATAACTTGTCCAGTGATGTAAGAGGCAGCAGGCAAAGAAAGGA
AAGTCACCAACGATGACACTTCTTCCGGTTCTGCAATGCCCTTAAGAGGGGTCCGAGACAAAATATCTTCCACAAGTTTAATCGAACACATGGACATTCA
TAATTCTAACAACAAACAATTAAGGAGATGATATGATATGGTGATCCTTTGACCAAGCGGCATTATCCACATACACATGGTACCTATGACACTTTGTCGT
GGTGAGTTGCATCTGCGTGTGACTGCAAGATATGGCTCTTGTTCTCAACGTCTCATTGTGTTCCACTTGTAAACCCCATCTTTCTCTCTCAACCTCCAAT
CCCAACAAAGCTTCTTCTACTTTTCCTCTTCCTCTTCCTCTTCTGGGACTCAACATAAAGAAAAGTCTCCAACCATCTCAGAAACTCACATTTTCATTGG
GTGAATCCGTGTCTGGTGCCACCCTCGTTGCTCTCCTCTCTGCTTCTTTCATCTTTGTTGATCCCGCACTTGCATTCAAGGGTGGAGGGCCATACGGGCA
AGAAGTGACAAGGGGACAAGATCTCACTGGGAAGGACTTCAGTGGCAAGACTCTGATCAAACAAGACTTCAAAACGGTGTAACTTTATTTGTTATTTTTT
AAACGAGTTTAATTTTGATACATTGTGATCCATGTGGCCATACTCACATTGTGGGATAAGACGTTGTTCTTATCATATATGACAATTCATAATTGGAAGA
CATTCAAATTAAATTATTTTTAAAATTAAGTTGATTTGGCATATGATGATGGGGTCAATCAAATTTGTGATTTTAATCTAAATTTAACTAGTTGATTAAG
CTTGATTGTTGCAGTCCATACTGAGACAAGCCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGACCTTTC
GGATGCTGATCTTAGAAATGCAGATTTTTCCCTGGCAAATGTGACAAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACA
TCTTTTAAGGGATCAAATATTACAGGCGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAGTTGCTGATGGTGAACCCA
ACAACTGGAAATGCTACGCGTGATACATTGTTCTGCAATTAGTATTCCATTGCTGAATACTCACTCCAAGACCTTCAAATGTTTGCATAGAATGGTTTCA
TAGCTAACAAAATACTCCCTTCATGTTGCTGGAATCTTGTATTTACATAGCACCACAATTTAGATTATTTCAAATTTCCATTCCCCATACACACACTTGA
CAATAACATTGTGATGTAATGCTCATAACCAGCCTACCTATGTTATATATTATTATTATTGTAATCATATAGCAAAAATCCTTTCATAAATGGTAGGTAT
AATAATCCACAATGAAGTGGATTGGGAAAGCCAAACATGAATAAG