Detailed information on CNT0000296 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P0CT38|TF25_SCHPO, E-value = 2e-09

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0025940, E-value = 1e-11 (O. sativa)

Expression of CNT0000296

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MGKLRWSIELFLLFLEPSLRKILGLEKSVYHMLNLLLIGLYIVLLRCHPLKLFTVLIL*

>peptide 2 (43 aa)
MAYFIAYKKVDDVFHVVDLFFKEVVRMHGLPRCTISGRDSKIS*

>peptide 3 (81 aa)
FWKHLGVRNCILTWTNVFYMDHVIFLGFIASSQGVQVDPSKVKAIQDWPTPKNISEVCLGLREERTRFLWWLRGYLRWLTS*

>peptide 4 (30 aa)
VLEALRCEKLYTNMDKCVLYGPCHFSWIYC*

>peptide 5 (98 aa)
MSPFEIIYSFNPLTPLDLLPLPNISQFKDKFGQVKAEYVKKLHEKTKAQIEKKIERYTKYANKGRKKVTFEPGAWAWVHLRKERFLSRRKSNHMIKLI*

Sequence

>CNT0000296
GTTTTGGAAGCACTTAGGTGTGAGAAATTGTATACTAACATGGACAAATGTGTTCTATATGGACCATGTCATTTTTCTTGGATTTATTGCTAGCTCACAA
GGAGTGCAGGTTGATCCATCGAAGGTGAAAGCCATTCAAGATTGGCCAACCCCCAAAAATATAAGTGAGGTTTGCCTCGGCCTAAGGGAGGAAAGGACTC
GATTTTTGTGGTGGTTGAGAGGTTATCTAAGATGGCTTACTTCATAGCCTACAAGAAGGTAGATGACGTTTTTCATGTTGTTGATTTGTTCTTCAAAGAG
GTGGTAAGAATGCATGGTTTACCTAGGTGTACTATAAGTGGCCGAGATTCCAAAATTTCTTAATCATTTTTGGTGGACTTTGTGGGGGTAAGACTAGAAC
TAAATTGTTGTTTTCAACTACATGTCATCCCCAAACTGATGGGCAAACTAAGGTGGTCAATAGAACTCTTTCTACTCTTCTTGGAGCCATCATTAAGAAA
AATCTTGGGACTTGAGAAGAGTGTTTACCACATGTTGAATTTGCTTTTGATAGGGTTGTACATAGTACTACTCAGATGTCACCCTTTGAAATTATTTACA
GTTTTAATCCTTTGACTCCTTTGGATTTGTTGCCTTTACCTAACATTTCTCAATTTAAAGATAAGTTTGGGCAGGTTAAAGCAGAATATGTCAAGAAGTT
GCATGAGAAAACCAAGGCCCAAATTGAGAAGAAAATAGAAAGGTATACAAAGTATGCAAACAAAGGAAGGAAAAAGGTAACATTTGAACCAGGTGCCTGG
GCATGGGTGCATTTAAGGAAAGAGCGGTTCCTTTCTCGAAGGAAGTCAAATCATATGATTAAGTTGATTTGAGAGCAAATGCTTTTCAAGAAGGAGGGAA
TGATGAGGACATCAAAGACCAGATCCAAGCCCAAAAGGAAGCCCAAGGCATAGGAGGGCGCATCACAAGAGCAAGAGCAAACAAGACCCAAGAAGCATTG
CAACATATAGTGGCTAATATGAGGGCAAACAATAGTATGAGGGGACCCAACATCTAAAGGCTTGCCTACCTGGGTTGCTAGTCACATGTATTGCTTGCTT
GGAGTGAGAACAAAAGACAATTATTAACTAAGGCATTTAATAAAAAATAATAATAATAATAAAGTGCTTGTAGTTAGTTTTGAGACTTGGACCTCAAGC