Detailed information on CNT0000303 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000303

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.7350.8110.1512.8157.4524.2956.2058.97100.0720.15700.0740.5040.816leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.511.522.533.544.555.566.577.588.599.5

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPKKILMAASFTSFTDFFNFSLMLPLFLSKLKW*

>peptide 2 (30 aa)
MGYKKYPKQSLEEQKDEEQQLSRGTQCHAA*

>peptide 3 (51 aa)
MLNTRLRCVRYRKCSFSIKEFIISGEFIHKHANYIFPNSKQPLQLISPLDT*

>peptide 4 (37 aa)
MVTVHKCLSCVPKYVAISWVLVEGSNHQNLHLNCWTI*

Sequence

>CNT0000303
GTTTGTTGCGTGTAGCTACGAATGCGCGTTGCAACTAATAGTTGCTCCTTTGTTATTTTACAAATTTAACTAATCTCTTGCAAAAACGTGGATTTCGGAT
TATTTTTTTTTTTGGCCGGGCAACAAAATATGATATTATAATATTAATATGCAAAAAAATGGGGTATAAGAAGTACCCAAAACAAAGTCTGGAAGAGCAG
AAAGACGAAGAACAACAGCTTTCTAGAGGTACACAGTGTCATGCTGCGTAAAGTGCTTTTGTGGATCACAATGCTGCACCCTTTTGATGTTCAACCAAGC
ATAGCACCGATTCCATATAGTTGATGCAAAAGGACATGTGAACAAAAGGTGTTGAATCGTTTCCTCCTCCCCATGGCAGAGAGCACAAGAATAGTCTTCC
GCTTGTAACTTGATTTGTCTTTTCTTAAGTTTGCCTCTGGTTTGGATTTTGTCCCGTATAACTTTCCACACAAAGATAGACACATTTGAGGTAATTGGAA
TTTCCCAAAGTCTTGAGCATAGAGGTAGTTTTTCCATATGGAATTTTCCCTGCAAAAGAGATAAATAAGCACTGTTATTAGTAAAGGATTTTGGATGTTG
AACACTCGTTTAAGGTGTGTTCGTTATAGGAAGTGTAGTTTCTCAATAAAGGAGTTCATTATATCTGGAGAATTTATTCACAAGCATGCCAATTATATTT
TTCCTAATTCAAAGCAACCATTACAACTTATAAGTCCACTTGATACTTAAATGGTTGTTACACTTCATAATTTCCCTTTTGTTCAACCATGGCATAAAAC
ATCTTATGGTAACAAGAAAAGTAGAAGGTAAAGTCATAGTAACCCTATAGGCCCTTATTCCAAGCCTTCTCTTGTACACCCTTTGACTCATGCCCAAAAA
AATTCTCATGGCAGCTTCATTCACCTCTTTCACTGACTTTTTCAACTTCTCCTTGATGCTACCATTGTTTCTTTCCAAATTGAAATGGTAACTGTTCACA
AATGCCTGTCTTGCGTACCAAAATATGTTGCAATAAGTTGGGTGTTAGTTGAAGGGAGTAATCATCAGAATTTGCATCTAAACTGTTGGACAATTTGATG
GGACGAACTTCGGAATTTCGCATTAGGAAGGGACAACTAGTACAAGAACATAATAAAACTCATAGATAGGGTAATTTTCTGACTTTCAATAAAAATATTT
TTATTTTTTTTCTTAACCAATGTCCTTAATACAATAATCAACATTTTTCTGGGTAAAAGCAATTAAATGGATTAATTTGATTGCTTTGATACGCTTAATT
GAGTGGTTAAACCATAGAGGAAATGAATGTGTTAAGGTTGGTTGTTTTGTTGCACCCAAAATTAACTAAGCATTGAAGTTACGGAGGATATGTTTCTGGT
TGTGTGAAAGATAAGGGATCCTGGTGATGATGAAGTAAGGGTGTTTGGCAGTAAAGTGAGAAATTTGTCATTCTTTTCCTGTCTTTTTTGTTTTTTTTTT
TTTAAATCTAATCTTACTCTTTACATCTTTCAGATGTCAACTTAACCTAACGTCCCAACTTTTTAAAGGACTAAAATAATCTTTGTTCAAAATTTAATGT
AAAATGGACCTCCACT