Detailed information on CNT0000309 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000309

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)2.4440.9151.8700.1550.19500.1430.7982.4242.362.1231.30900.181leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.6

Peptides detected in this lncRNA

>peptide 1 (129 aa)
THKFKISNSFKQLCIINTLKRPLFIKKNIFNYTSTVNSSVHFLCNHHESFVIIGNYKHGESYQSLPLGDPEVLKNKAVGVNFIDVYFRTGVYKVPSLPYT
PVVYDSVGKDTFEVVPVILFLYRISKSND*

Sequence

>CNT0000309
ACTCATAAATTTAAGATAAGTAATTCCTTTAAGCAATTATGCATAATAAATACTCTTAAGCGCCCACTTTTCATAAAAAAAAATATATTTAATTACACTA
GTACAGTGAACTCTTCTGTTCATTTTCTTTGCAACCACCACGAAAGCTTCGTTATCATCGGCAACTACAAGCATGGTGAAAGCTATCAGAGTTTACCACT
TGGCGACCCTGAGGTTCTGAAGAACAAAGCTGTTGGGGTTAATTTCATTGATGTCTACTTTCGCACTGGGGTTTATAAAGTCCCCTCCTTACCTTACACT
CCAGTAGTCTATGATTCTGTGGGAAAGGATACCTTCGAGGTAGTACCTGTTATATTATTCCTATATAGAATTTCAAAATCAAATGATTGAGTATTCCATC
AGTAGTTCATTTTTCTCATTCATGAAGTTCTCCTTCGCTTATGATAATTAAGTGTCCAGAAATGTAAATAGATTTGTGGATCAGTTGATCCTACATTGAT
AATTACTTAAAACTATAACATCAACAAAAACCAACCAGATCTTAGATGATAAACTCAACATTTATTATTGAATTCCCACACCCTATTAAAGAAGTCAAAT
TAAATACTTTTCTCATTTAGAAATGAATTCATAGTGTTTCATCCTTTAGTATTGGTTTTCTCAATTGGCTTTGCTAGAAATGTGATGATGTCAAAGTGAG
TATTTGTATATATCAATATTATTAGTTACAAACACACGTAATGTTGATGGGCAAACCCAGAGGGCAAGAGTTGATAAGTAATAGATTCTAATCAGTAGAC
TAGAGCCCTGAAGTTCCAAGGTTACTAAAGTTCTATGGTTATTGTCTGATTAATGTAATATCTAGGACCATACTCATTAGCTTACTTCATTGATTATGAC
CTCACTGATATC