Detailed information on CNT0000314 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LSX7|PEX22_ARATH, E-value = 6e-40

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000314

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)14.67815.43915.93826.02611.53815.44314.50411.33418.84619.73216.73318.46112.11722.31118.7leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0246810121416182022242628

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MYLLIKPKELLQMCSVLHLWNSSLDPYETKTTTNQMLFINVSKFVSMFISISTFTISFFPVLLDV*

Sequence

>CNT0000314
TGTTGAGATAGTATATATTAAAGATGTTAGTATAAGAAGAGAGTTCTTGTAGCATTGGAAGAAGCAGGGGTATTCACTTCAGGTCGTCTGGTCAAGGACA
AGGTTCTGTTCTGCAGCACAGAGAATGGACGGTCATCGTTTGTTCGGCAATTGGAACCTGATTGGCATATTGATTCAAATCCTGAAATTGTCACTCAGTT
AGCTAGGTTTATCAAGTATCAACTTCATGTATCTCCTTATAAAACCGAAAGAACTGCTGCAAATGTGTTCAGTGCTCCATCTCTGGAACAGTTCTTTGGA
TCCATATGAAACTAAAACCACTACAAATCAGATGTTATTCATAAATGTCTCCAAGTTTGTTTCTATGTTCATCTCGATTTCCACATTCACCATAAGTTTT
TTTCCAGTTTTACTAGATGTATGAGAACAAGGTTAGATTTTTCTTAAAGATTTAAGGTTCTCTCACTCTAGGTAGGTGAAAGACCATATGTGTATGTTGA
TGCTTTGAAGAAGTTTTACTATTTTCTTTTTTCTTCTTTGTTTTGAAATTTGTGCATTACATTGTATCCCATCCAGACATTTTAGACTGGCAAAGTGACA
ATTTTATTAGATATTTGATCAAGTTTCATTACGTTATACCATCATGAATAATATTAGTGACCATCTTCCAAATGTCAGGTGGCTATGAAAGAAGTTTATT
GATTCTTGATTGTACACTTTTGAAACATTTTGGTGTATTTGAATCGCTG