Detailed information on CNT0000365 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SIB9|ACO2M_ARATH, E-value = 2e-11

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000365

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)00.2050.20900.24300.23902.250.80.872.3761.0262.1010leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.20.40.60.811.21.41.61.822.22.42.6

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MIVRLGLIVAASIAALTVEQLNVNNTRSGTSAYSIFTTYYCY*

Sequence

>CNT0000365
CTGTCTCGAGCACTTGAATTCCTTTGAATATATCATTTACTGTGTATAGGGTGTTTCTTTGTCATCATTTGATCCATTTAGCTGAGCCTTCCAAGTGGGA
AAAATGTTTGGTTGTTATCGTTGTAGAGTGCTTCTCGGCCATGTTCATGTGCCAGTGATGAGTTTTTAAGGATTATAAGACATTATAATGTGGCCTATAG
ATTCATGATAGTCAGGTTAGGACTCATAGTAGCTGCTTCCATTGCAGCCCTCACAGTTGAGCAGCTGAATGTGAATAACACAAGATCAGGTACTTCTGCT
TATTCAATATTCACCACTTATTATTGTTATTAATTTTTTTTGACAATTTTTGATCATTTCACTTCTCAACATGCAAAATACGTAAAAACTCATCACAGTT
TGCAACTATAATTAGACACAATTTAAGAACATATACTCCTCACAACGTCCATTTTGAAGTGAAAACTACGCAATGGTGTTACAGCAACAGACTTAGTTCT
AACTGTGACTCAAATTCTCAGAAAGCATGGTGTTGTGGGGAAATTTGTTGAATTTTATGGTAATTAAATTCTCTTGTGGCCT