Detailed information on CNT0000373 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000373

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)1.1040.6331.42200.152.8342.071.2484.483.832.2854.4042.9161.2980.875leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.250.50.7511.251.51.7522.252.52.7533.253.53.7544.254.54.75

Peptides detected in this lncRNA

>peptide 1 (68 aa)
RRCSLNKGRKSCCRRHRRTALLPRPSLAKPKLSLPCHHLLQSFHIRREKVQASGQSLLSYDLNFVNHT*

Sequence

>CNT0000373
CGTCGTTGTTCCTTAAATAAAGGAAGAAAATCTTGTTGCAGGAGACATCGAAGAACAGCCCTCCTTCCTCGCCCTTCGCTCGCAAAGCCAAAGCTCTCGT
TGCCGTGCCACCATCTTCTCCAAAGTTTTCATATTCGAAGAGAAAAAGTTCAGGCGAGTGGTCAATCTCTACTGTCTTACGATCTCAATTTTGTCAACCA
CACCTAATAGTTGTGAATCCGATATATCGACCCTACTATTTAGAACTCCTAAGTTGGAAGATGTGACTTTCATTATTCTGTAACATAAATATCTAAATTT
GGTTTAGTAATCCTAATTGCTTGCGTTTAATTTCTTCATCCCCATGCATGTGCTTATTCCCCCAATGAGATGCAGATACCTATGTGCTAATTAAATTGAC
TGATCAAACTGTGTTATAATGCACCAAGAAATTTTACTGCATGGATTTCACTAGCTAACTTGAATAATTATTTTTTGTTCCATAAATTTGACAAGAACGT
TCTTTGGTCCCCTCATCGCTCTTTTACATTCACTGGTTCTTCACCTTTGTTCAAGTAAGTTTTGTTACCATTAACAACATTGTGATTGTCAAATATAAAT
TCATGAAAGTGGATCAATTCTATATGTCAGAAAAAAAATTGGGCCTCGTAGGACAGTAACAAATCAATGTGTACTGGTGGTGACAGCTGAAAATAACAGT
GAGATTTTAATAGAAAAGCTCAATTCTAAGATAAATGTACACACGGGGGAAACTGAATAAGAGGTAGTGAACAAATATGTTGAGTGATCAATGCCTTTGA
TCAATGAGCCCAAACTGTTTGGTCTCCTGTGGAGTCATAAAGTTATAATTGTCCATATAGTCCAAACTTGAGTGTAGAATTAAAGAAACAAAATTATGTG
TTAGATGCACAACACTGTGTGAAGTTGTCACCAATATCTCAA