Detailed information on CNT0000400 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000400

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.59401.9490277.115132.394123.117348.9621.1640.93100000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)0100200300255075125150175225250275325350375

Peptides detected in this lncRNA

>peptide 1 (78 aa)
GEGGFGTGGCLGVLGGGLHGTYVELTTVKKRTLRHKRSAALEAISHKLLTLRTLYLLLWFSVCELGIELQRMSGGFIG*

>peptide 2 (50 aa)
GRWLWDRWVFGSFGGWITWHICGTNHSEKENIETQEKCSLGSHFSQVAHS*

Sequence

>CNT0000400
GGGGAAGGTGGCTTTGGGACAGGTGGGTGTTTGGGAGTTTTGGGGGGTGGATTACATGGCACATATGTGGAACTAACCACAGTGAAAAAGAGAACATTGA
GACACAAGAGAAGTGCAGCCTTGGAAGCCATTTCTCACAAGTTGCTCACTCTTAGAACACTATACCTCTTACTTTGGTTTAGTGTGTGTGAGCTTGGGAT
TGAGTTGCAGAGAATGAGTGGGGGTTTTATAGGGTAAGATTGTAGAGCGT