Detailed information on CNT0000466 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q94F62|BAK1_ARATH, E-value = 1e-26

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005031, E-value = 3e-24 (V. vinifera)

Expression of CNT0000466

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MGPAIDHAPVIAKPLTKDDLIDYFISSCKPKHNWRLRRQKSVTSRSQYINKKELRVCVGTWNVGGKLPPDDLDIDDWLGINELADIYVLR*

>peptide 2 (38 aa)
MNGDRRCWHAHFFTHFLVKKHSVRSLTHSLTHPLLVLV*

>peptide 3 (43 aa)
MVSLDLKWSSGQCMVMGKVESSTKAKGEDMPSLCASSTYEGKE*

>peptide 4 (72 aa)
MFLGDALAVLKNSMSDPNNVLQSWNCTLVTPCTWFHVNCNSENSVTRVDLGNANLSGHLVPQLGQLLILECL*

Sequence

>CNT0000466
CAAATTTATAAATAAAAAGAAATGAACGGCGACCGTCGTTGTTGGCACGCTCATTTTTTCACTCATTTTCTAGTAAAGAAGCATTCGGTCCGTTCACTGA
CTCACTCACTAACTCACCCTCTGCTTGTGCTCGTCTAGCGCTGTCGTCGACTCACTCACCATTTTCGTGCTCACTTATAACAGTGCCCATGCCCTCTCGA
GGAAAATATATTTGAGTGGCAATTTGCGATTAGAGGGCCTCGTGATACCGAATTTGAGGGTGGGTGCAGAATGGTATCCCTTGATCTGAAATGGAGTTCA
GGCCAATGCATGGTTATGGGGAAGGTAGAGTCAAGTACTAAAGCTAAAGGGGAAGATATGCCTTCCTTGTGCGCTAGTTCGACCTATGAGGGCAAAGAGT
AAATATTGTTGCTATGGGACCAGCCATAGATCATGCTCCTGTTATTGCCAAGCCCTTGACAAAAGATGACCTAATTGACTACTTCATATCTAGTTGCAAG
CCCAAACATAACTGGAGGTTAAGGAGGCAAAAGTCAGTAACTTCTAGGTCTCAGTATATAAACAAAAAGGAACTAAGAGTTTGTGTTGGAACATGGAATG
TTGGAGGAAAGCTTCCACCTGATGACCTAGATATTGATGATTGGTTAGGCATTAACGAGCTAGCTGATATCTATGTTCTTAGGTGATGCCTTGGCTGTAT
TGAAGAATAGTATGAGTGACCCTAACAATGTTCTTCAAAGTTGGAATTGTACCCTTGTCACTCCTTGCACATGGTTTCATGTTAATTGCAACAGTGAAAA
TAGCGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCATCTTGTTCCACAGCTTGGTCAGCTCCTAATTTTGGAATGCTTGTAAGTTACAAAA
CAGATATGACATTATTGGCTCAAATATGCTTAATTTTACTAGTAATTCTTGATTGTTGGCTGAAATAGATATGACCAGGCAAAGGTTATGCTAAAAGTAA
ATA