Detailed information on CNT0000476 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q5ZJ73|CREG1_CHICK, E-value = 1e-10

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000476

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNPTCSKISLTAKVLQKLLIFSTLTFKNI*

>peptide 2 (48 aa)
EDLFIRLELGGVCWDRFLIQSKPERLKDSRQSKKEKDVLVIDVDPKKT*

>peptide 3 (42 aa)
MKDWPEDHHFQVFKLEIENIFLINWFGGPKPLTVEQYLHPKM*

>peptide 4 (39 aa)
MENYLYAGMWFHLVMDYLMIKLHSQSVNSLLGPVAGETQ*

>peptide 5 (32 aa)
MSYSYPQKSIILDARFHHEFTFHYYSRDFYFGV

Sequence

>CNT0000476
GTGAGGATTTATTTATTCGCCTGGAACTAGGTGGAGTGTGTTGGGATAGATTCTTAATCCAATCTAAGCCTGAGAGGCTGAAGGATAGTAGACAGAGTAA
AAAAGAAAAAGATGTTCTTGTTATTGATGTCGATCCCAAAAAAACCTGACCCAGATGATGCTCCTGCCTCAATTTCTGGGGAGTCTTAAATACTATCTCA
GCTGATTTGGGTGGAGCTCCCTTTCTTCACTATCCTTCTTTTTCATTTTTTCTGCTCTAAATTTCTATTCCGTATTTCTTTTGTGCTACCTTCTACATTA
TTGACCATTGGATTTGTTAATCTCAAATACTTACAAGTTATTGTTATGGAAAATTATCTTTATGCAGGAATGTGGTTTCATTTAGTGATGGACTACCTAA
TGATAAAGCTTCATTCACAGTCAGTGAATTCCCTCTTGGGACCTGTGGCAGGAGAGACCCAATGAACCCTACTTGTTCCAAAATTTCTCTAACCGCAAAG
GTCCTGCAGAAACTTCTAATCTTTTCAACACTTACCTTCAAGAACATATGATATGATGTATGGGTACTCCTAGATGGTTGGTGTAGGCATACTGGTCACA
TATCCAGTCCCGGTACTTATTGGACACGACTGAAATTGGTTGATGAAAAGTCAAAGGAAGCCAAAATTGCTAGAAATGCCTTGTTTTCCAAGCATCCAGA
GATGAAGGACTGGCCTGAGGATCACCACTTTCAAGTCTTCAAATTAGAAATTGAAAATATATTTCTAATTAATTGGTTTGGTGGTCCAAAACCACTCACA
GTGGAACAGTACTTACATCCCAAAATGTGAGTCATTGGTTTGGTGGTCCAAACCCCTTCACTAACATTATAGCTAAGTTCCGACAAAAAAAAAAATTATA
GCTAAGCAGGAGATTGTTATTTTGGTCATTGTTGTAACTCATTTTTATATCTAGAGAAGGGTATCGTATTCTTAAATATCCCCTATAAAGTGGTCTATTG
ATATTTTGGCCATGGAAGTTGGAAGATGCTTTGTATAATATCTCATTATATCTTGAGAAGGCTATGTCGTATTCGTATCCTCAAAAATCCATTATTTTAG
ACGCTCGCTTCCATCATGAATTCACGTTCCACTATTATAGCCGGGACTTTTATTTTGGTGTCAT