Detailed information on CNT0000541 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q948P6|FRI3_SOYBN, E-value = 3e-29

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000541

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MVPFSNGPNVVIDAYAIVASVNFILREAFFFFLYSYWVHNYFSILMVFFFFSFFFLCVMLFSKLLKPISSLLILCKVNYL*

>peptide 2 (89 aa)
MEVAMELALLLEKLTNEKLLNLHSVASKSNDAQLSDFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAFHFRCI*

>peptide 3 (38 aa)
MKPDPETYNWVIQAYTRAESYDSINAMDPKSWKILQLL*

>peptide 4 (34 aa)
MKSCLTCTVLPQRAMMRNCQILLKASFWVNRWKP*

>peptide 5 (48 aa)
KYHSSNFMDFSPAKKQTLTSYNEKRQSYQPLESLFTKDQGANSFLVIK*

>peptide 6 (29 aa)
MEDPTTVVIETDFQWCISQSDPTNIIGTT*

Sequence

>CNT0000541
AAATATCATTCAAGTAATTTTATGGATTTTTCTCCAGCAAAAAAGCAAACTTTGACTAGTTATAATGAAAAAAGGCAGTCATACCAACCACTGGAGAGTT
TGTTTACCAAGGATCAAGGGGCCAACAGTTTTCTAGTGATTAAGTAATTACATAAGGAAGCTGAAGAGCTATGGAAGTAGCAATGGAACTTGCCCTGTTG
TTGGAGAAGCTGACAAATGAAAAGTTGCTTAACTTGCACAGTGTTGCCTCAAAGAGCAATGATGCGCAATTGTCAGATTTTATTGAAAGCGAGTTTTTGG
GTGAACAGGTGGAAGCCATAAAAAAAATCTCTGAATACGTTGCTCAACTTAGAAGAGTTGGAAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTACT
CCATGAGGAAGGAGTAGCATTTCACTTCAGGTGTATTTAACTTGCCAGTATTCAAGCATTTCACTTCTATACACAAACTACAATTAAAAGGAAAAGTGTA
TTTTTATGGTTACCGCTCGATCTTTTTACTTCACCTAAAAGATTTCTTTATACCAAAAGCACTTTGGGCTCTTGTGAATAAATCTTCTTCAAACGTGCAG
TCATAAATAACTTTTCAAGTATTATAATTTTTAATCTAAACTGAAACATGGTATAACACTTCTATCTCATTCAATGTTGTACTCAAGCATCCCTGTGCTG
CAATACTTAGGTAATGAGAACTGATTTGGTTTACTTGTTCAACTGATTTGATTAGCATTCAATTGATACTTTATATGTTTTCTTTCTTCGGAAAAGAAAA
GCATGATGACTGTTTAGGATATATTTGATGTATTGAGCCACCTTTATATTCTAACTTCATACATAATCTTAGAAAAACCAGCTGCTTAGTCGCTTAGATG
ACTTCATGGTTCCCTTCTCCAATGGGCCTAATGTGGTCATTGATGCATATGCCATAGTTGCATCTGTCAACTTCATTTTAAGGGAAGCTTTTTTCTTTTT
CTTATACTCTTACTGGGTTCACAATTATTTTTCAATTCTCATGGTATTTTTCTTTTTTTCATTTTTTTTTCTGTGTGTGATGCTCTTTTCTAAATTGTTA
AAGCCTATATCTTCATTATTAATTCTATGTAAGGTAAATTATCTATAATTTGTTACATAACAGATTACATGAAGCCTGATCCAGAGACATACAATTGGGT
TATTCAAGCTTATACTAGAGCTGAATCTTATGACAGTATTAATGCCATGGACCCTAAATCATGGAAGATCCTACAACTGTTGTGATTGAGACAGATTTTC
AATGGTGTATTTCTCAAAGTGACCCAACTAATATTATAGGGACTACATAACAACACCTTGCATATTCAGGGAGTATTGATTAAAATGGAGTTTACTCATT
TCTCAGTGGAAAATGCAAGGATCATTCATGAGTGAACATAACATGTGAACGATGAAAATAGAATGTATGCAATTGGCAGAATAAAAGCATGCTAAACGAA
GATGTATGATAATGCAATGACTCATGCAAATGCAATGCATGAATATGATAAATGATAAATGATATGTTCATTACGATGCCATGAAGAGATGTATGATGCG
ATCAAGGAATAAGCCAAAGTGAGTTTGCTATCTGCCTCCCTTAATTTAGGAACCTAATGGAAAGGATCCAAAAGTCCCTTTCTAGTGACAACTCCCAAGG
GCTTCTAGAGATATCATTCTCTTAGGTAATACATTG