Detailed information on CNT0000542 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000542

Sequence

>CNT0000542
AGGAGCCAAAACTAGTACCCACAATGCAGTGCCAAGCTGGACCATAAGAAGAATCAAATTCCTGTAAAACCAGAATGTTTTTGTTATGAACCACTCAAGC
AGGGGTCAAATAAAGTCAGAAACAGGTAAATGAACAACAAAGTGACTTTCAATTTAGAAATGAGCAGTGTCTGTAAGTAAATAGCCAATGTTGGTGTTAT
ATAGATTCATCTAATCTCCCACGCTCTCTCACATCCACTGTGTTACTTCTTACTCGGATTGTCACATCCTAGTAGTATTAGCAACACACTTTCTAACATG
TTGCTTCTAACACATTCTCTATTATACTAATCATGAGTGAAATTCATTAAACAAGGAGACTCACAATTTTTTT

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GLYMA05G34910.1 Uncharacterized protein protein coding CNT0000542 860 311 CDS Cis
GLYMA08G04800.1 Uncharacterized protein protein coding CNT0000542 249 120 CDS Trans