Detailed information on CNT0000557 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8LEB6|Y5185_ARATH, E-value = 4e-20

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000557

Peptides detected in this lncRNA

>peptide 1 (124 aa)
FLGKNQKPQTHLVVGDAAAGEDPRPVFGSCDMNLRSLVFAESEKLRLDHIYYLILGLNFNSLYCLTLSLTPSTFFFSLAHSTPFLSQSPLNHHHCDSRGD
SASTTDVPSTSFNKVFGICLRLEQ*

>peptide 2 (58 aa)
MLTYLHEEIKPKVVHRDIKSSNILIDDDFNAKIFDFGLAKLLGVGKSHITTRVMGTLG*

>peptide 3 (59 aa)
MNCTLSIPDQSDNCLFGAKGYTLFLRSSAYFEPRLNKFGDFNSVFPIILYIVNLCKLLM*

>peptide 4 (41 aa)
MGSVDDQIDFIMGDFFLLTPKLKVLHKLSQVALLQTDSRKR*

Sequence

>CNT0000557
TCTTTTTAGGGAAAAACCAAAAGCCCCAAACTCATTTGGTGGTTGGAGACGCGGCTGCAGGAGAGGATCCGCGTCCAGTATTTGGTAGTTGTGATATGAA
TTTGAGAAGCCTAGTGTTTGCAGAGTCTGAAAAGCTGAGATTGGATCACATATATTATCTGATTCTAGGGTTAAATTTTAATTCACTCTACTGTCTGACT
CTCTCGCTCACGCCTAGCACGTTTTTTTTTTCTCTTGCTCACTCTACTCCGTTCCTTTCCCAATCGCCACTCAACCATCACCATTGCGACTCACGAGGAG
ACTCAGCCTCCACGACCGACGTTCCCTCGACATCCTTCAACAAAGTTTTCGGCATTTGTTTGAGGCTGGAGCAATGAGGCTTGGGAGGGATGTTTTGGTT
CTAACACAGACAACTAATTCCAGATCACTAGCTTTTCTTTGACAATCATTGAATGAAGGCAAGATGCTAACTTACTTGCACGAGGAAATTAAGCCAAAAG
TTGTACATCGAGATATTAAATCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATTTGACTTTGGGCTGGCAAAGTTATTGGGTGTTGGAAA
AAGTCATATCACAACTCGAGTAATGGGTACTCTTGGGTAATCTAATCATGAATTGCACACTGAGCATACCAGATCAATCTGACAATTGCTTATTTGGTGC
CAAGGGCTACACTCTCTTCTTAAGGTCAAGTGCTTACTTTGAACCCAGGCTTAACAAATTTGGAGATTTTAATTCAGTTTTTCCAATTATCCTTTATATT
GTGAATCTGTGTAAGCTTCTGATGTAGTTGCAGGTTTCTTGTAGGACCTTAGATGCTTATACCTGAAAACATAGAGAATAAAGAGTTTTGAGAAAAAATG
AAATGGAGGCCACAAAGGCCGAAAAGATGATTACACATAGGGAAGCGATCTTTTCCTGCCCCAAAGGAACTTGGTTTGTCATAGAGTAGGAGGAAAAGCT
TGCTGCAAAAGCATCCAAGGTGCACACTACAATGGGAAGCCAAATATCTATTCTTATGAGGGAGCAACTGTAAACGATCTAAACTGTATAAAGCTACTAC
TTATGGGGTCGGTGGATGATCAAATTGACTTCATAATGGGTGATTTCTTCCTCTTGACACCAAAGTTAAAGGTACTTCATAAGCTATCACAAGTTGCACT
CCTTCAAACAGATAGTAGAAAAAGATAGGTTTAATTATAAGATTGAGGAAAAATAAAAAAGTACCTAGACGGGTGTAAGGTGGTGCATGCAATGAGATAC
TAATTGAGTGACAATATTTTATTTCTATTTTCTCTAAAACCTTGTGCTTTGGCAGATTGCTTGAACTTTTGCTTTCTCCTTTGTTTATGGAAGCATTAAG
CTCAAGTACCTCAAGGTATTTTAATGAATCCCTTGTACATTTAAAATGGA