Detailed information on CNT0000613 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000613

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)000.1940000.88900000000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.050.10.150.20.250.30.350.40.450.50.550.60.650.70.750.80.850.90.95

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSTSTRRVSHLTTKAYVCKDVLEDGRPLLIITSRNPLCTWCVFL*

>peptide 2 (30 aa)
MIRLANMLGVKLLLSCFENLCHFLLIVIIS*

Sequence

>CNT0000613
AGGATGATTGTATAAATTTAACTTTTAGATGAGATTGTTTTGAGGATTATTGCCAGAGATGATGAGGTGGAACTGATTTGTAGTGCATGATGGACTTTGG
ATTATTTCCTCTCTAATATGTTTATGATTTTACATATGAATGTTTTCTTCTTGTGAAGTTTTATGTTATTCCATTTTTCTCACTTGACTTATATGATGTG
AATTATCTTGTTGTAGGTCTAGAAGACAAACACAAACATATCTTTTATCCTTGATTCTGCTTCTTTTTTTTTTTGTTTAGTTTTTTCTTGCATGTCTACA
AGTACAAGGAGAGTATCCCACTTGACAACAAAGGCTTATGTTTGCAAGGATGTTCTTGAAGATGGAAGGCCTTTGCTGATTATAACATCCAGAAATCCAC
TTTGCACTTGGTGTGTTTTTTTGTAGTGTAAATAAGTAGTTTCTTTTTAACCATTTTTAGAGATGGTGATTTTGGGATATTCAATGCATCAAATTGAAAT
GTAGCTATCAAAGGTAATATGATTAGGCTAGCAAATATGTTAGGTGTCAAACTCTTACTGAGTTGTTTTGAAAATCTTTGTCATTTTTTGCTTATAGTGA
TCATCAGTTGAGGTTCTTATCTTTGTC