Detailed information on CNT0000617 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0000617

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.8950.3590.36701.28000.3930.8770.7010.38101.43900leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)00.10.20.30.40.50.60.70.80.911.11.21.31.41.51.6

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LQRKGPVRFFESLNYAYTVMSNSYAILQRYLEIRLFSV*

>peptide 2 (33 aa)
MKRRDLLVKLLETCCSKISIPQLHSQCLKVGLAH

Sequence

>CNT0000617
AACTCCAAAGAAAGGGACCAGTTAGGTTTTTTGAAAGTTTAAACTACGCGTATACGGTGATGTCAAATTCTTATGCTATCTTACAGCGATATCTCGAAAT
AAGGCTCTTCAGCGTTTGAGATATGCTGCTAAAGCCACAAAAAGTGAAGCTGATTGCATAAATAGAATATGATTGAGAGCTAATAACTAATTCAGATGAT
CTTGTAAAGGTTACAATCAGTCATTTTACATGAAGAGGAGGGATCTTTTAGTCAAGCTATTAGAAACTTGCTGCAGTAAGATATCAATCCCACAGTTGCA
CTCACAGTGTTTGAAAGTGGGCCTTGCCCATG